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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170164260
CEOM01207526
299323
Cyanobacteriota
CAT
Met
>WENV170162640
CEOM01048379
73534
Cyanobacteriota
CAG
Leu
>WENV170162846
CEOM01069305
195553
Cyanobacteriota
GGG
Pro
>WENV170162513
CEOM01036817
283430
Cyanobacteriota
CCA
Trp
>WENV170162566
CEOM01041460
118720
Cyanobacteriota
CAA
Leu
>WENV170162582
CEOM01043248
400473
Cyanobacteriota
GAC
Val
>WENV170163321
CEOM01120542
414584
Cyanobacteriota
GAC
Val
>WENV170162749
CEOM01060319
180442
Cyanobacteriota
CGG
Pro
>WENV170162457
CEOM01032642
291400
Cyanobacteriota
GTG
His
>WENV170163541
CEOM01145705
185187
Cyanobacteriota
CCG
Arg
>WENV170164040
CEOM01196203
283431
Cyanobacteriota
GTG
His
>WENV170163469
CEOM01135236
410287
Cyanobacteriota
CCC
Gly
>WENV170162455
CEOM01032303
178673
Cyanobacteriota
CCG
Arg
>WENV170163355
CEOM01122750
400471
Cyanobacteriota
TAC
Val
>WENV170163519
CEOM01141500
400471
Cyanobacteriota
TAC
Val
>WENV170163829
CEOM01178701
400471
Cyanobacteriota
TAC
Val
>WENV170164538
CEOM01374193
185579
Cyanobacteriota
CAT
Met
>WENV170162514
CEOM01036817
177076
Cyanobacteriota
GTC
Asp
>WENV170163920
CEOM01187996
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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