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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170188452
CEPB01043216
339686
Cyanobacteriota
TAC
Val
>WENV170188477
CEPB01045727
339686
Cyanobacteriota
TAC
Val
>WENV170188450
CEPB01043057
25356
Cyanobacteriota
GGA
Ser
>WENV170188595
CEPB01059180
339690
Cyanobacteriota
TGT
Thr
>WENV170187928
CEPB01001367
237899
Cyanobacteriota
CCA
Trp
>WENV170187939
CEPB01002596
58999
Cyanobacteriota
CAG
Leu
>WENV170187983
CEPB01006319
148812
Cyanobacteriota
CGG
Pro
>WENV170188956
CEPB01104218
101255
Cyanobacteriota
TAG
Leu
>WENV170189189
CEPB01126769
379587
Cyanobacteriota
GTT
Asn
>WENV170188959
CEPB01104514
147238
Cyanobacteriota
CCG
Arg
>WENV170188772
CEPB01081256
147238
Cyanobacteriota
CCG
Arg
>WENV170188128
CEPB01017507
68425
Cyanobacteriota
CAG
Leu
>WENV170187948
CEPB01003455
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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