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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV004103
DQ366711
401934
Cyanobacteriota
GGT
Thr
>ENV004110
DQ366715
401934
Cyanobacteriota
GGT
Thr
>ENV004111
DQ366715
401934
Cyanobacteriota
GGT
Thr
>ENV004123
DQ366727
118720
Cyanobacteriota
CAA
Leu
>ENV004135
DQ366744
285848
Cyanobacteriota
CAT
Met
>ENV000539
AF547626
289209
Cyanobacteriota
TGC
Ala
>ENV000541
AF547627
289209
Cyanobacteriota
TGC
Ala
>ENV000545
AF547629
289209
Cyanobacteriota
TGC
Ala
>ENV000547
AF547630
289209
Cyanobacteriota
TGC
Ala
>ENV000551
AF547632
289209
Cyanobacteriota
TGC
Ala
>ENV000553
AF547633
289209
Cyanobacteriota
TGC
Ala
>ENV003828
DQ016307
289209
Cyanobacteriota
TGC
Ala
>ENV003954
DQ181751
289209
Cyanobacteriota
TGC
Ala
>ENV003977
DQ181763
289209
Cyanobacteriota
TGC
Ala
>ENV004127
DQ366733
30082
Cyanobacteriota
TGA
Ser
>ENV004128
DQ366733
30082
Cyanobacteriota
TGA
Ser
>ENV004121
DQ366723
401929
Cyanobacteriota
TTG
Gln
>ENV004132
DQ366741
401929
Cyanobacteriota
TTG
Gln
>ENV004137
DQ366745
401929
Cyanobacteriota
TTG
Gln
>ENV004134
DQ366742
46946
Cyanobacteriota
TAA
Leu
>ENV004124
DQ366728
177109
Cyanobacteriota
CCT
Arg
>ENV004125
DQ366730
177109
Cyanobacteriota
CCT
Arg
>ENV004122
DQ366727
283431
Cyanobacteriota
GTG
His
>ENV000538
AF547626
183676
Cyanobacteriota
GAT
Ile
>ENV000546
AF547630
183676
Cyanobacteriota
GAT
Ile
>ENV000550
AF547632
183676
Cyanobacteriota
GAT
Ile
>ENV000552
AF547633
183676
Cyanobacteriota
GAT
Ile
>ENV003953
DQ181751
183676
Cyanobacteriota
GAT
Ile
>ENV000898
AY033307
337376
Cyanobacteriota
TGC
Ala
>ENV000904
AY033310
337376
Cyanobacteriota
TGC
Ala
>ENV001136
AY579906
337376
Cyanobacteriota
TGC
Ala
>ENV001138
AY579907
337376
Cyanobacteriota
TGC
Ala
>ENV001140
AY579908
337376
Cyanobacteriota
TGC
Ala
>ENV001142
AY579909
337376
Cyanobacteriota
TGC
Ala
>ENV001144
AY579910
337376
Cyanobacteriota
TGC
Ala
>ENV001146
AY579911
337376
Cyanobacteriota
TGC
Ala
>ENV001150
AY579914
337376
Cyanobacteriota
TGC
Ala
>ENV001152
AY579915
337376
Cyanobacteriota
TGC
Ala
>ENV001154
AY579916
337376
Cyanobacteriota
TGC
Ala
>ENV001156
AY579917
337376
Cyanobacteriota
TGC
Ala
>ENV001158
AY579918
337376
Cyanobacteriota
TGC
Ala
>ENV001160
AY579919
337376
Cyanobacteriota
TGC
Ala
>ENV001162
AY579920
337376
Cyanobacteriota
TGC
Ala
>ENV001164
AY579921
337376
Cyanobacteriota
TGC
Ala
>ENV001166
AY579922
337376
Cyanobacteriota
TGC
Ala
>ENV001168
AY579923
337376
Cyanobacteriota
TGC
Ala
>ENV001170
AY579924
337376
Cyanobacteriota
TGC
Ala
>ENV001172
AY579925
337376
Cyanobacteriota
TGC
Ala
>ENV001174
AY579926
337376
Cyanobacteriota
TGC
Ala
>ENV001176
AY579927
337376
Cyanobacteriota
TGC
Ala
>ENV001178
AY579928
337376
Cyanobacteriota
TGC
Ala
>ENV001180
AY579929
337376
Cyanobacteriota
TGC
Ala
>ENV001182
AY579930
337376
Cyanobacteriota
TGC
Ala
>ENV001184
AY579931
337376
Cyanobacteriota
TGC
Ala
>ENV001186
AY579932
337376
Cyanobacteriota
TGC
Ala
>ENV001188
AY579933
337376
Cyanobacteriota
TGC
Ala
>ENV001190
AY579934
337376
Cyanobacteriota
TGC
Ala
>ENV001192
AY579935
337376
Cyanobacteriota
TGC
Ala
>ENV001194
AY579936
337376
Cyanobacteriota
TGC
Ala
>ENV001196
AY579937
337376
Cyanobacteriota
TGC
Ala
>ENV001233
AY579958
337376
Cyanobacteriota
TGC
Ala
>ENV001239
AY579961
337376
Cyanobacteriota
TGC
Ala
>ENV001243
AY579963
337376
Cyanobacteriota
TGC
Ala
>ENV001255
AY579969
337376
Cyanobacteriota
TGC
Ala
>ENV003557
DQ009327
337376
Cyanobacteriota
TGC
Ala
>ENV003559
DQ009328
337376
Cyanobacteriota
TGC
Ala
>ENV003561
DQ009329
337376
Cyanobacteriota
TGC
Ala
>ENV003563
DQ009330
337376
Cyanobacteriota
TGC
Ala
>ENV003565
DQ009331
337376
Cyanobacteriota
TGC
Ala
>ENV003567
DQ009332
337376
Cyanobacteriota
TGC
Ala
>ENV003569
DQ009333
337376
Cyanobacteriota
TGC
Ala
>ENV003571
DQ009334
337376
Cyanobacteriota
TGC
Ala
>ENV003573
DQ009335
337376
Cyanobacteriota
TGC
Ala
>ENV003575
DQ009336
337376
Cyanobacteriota
TGC
Ala
>ENV003577
DQ009337
337376
Cyanobacteriota
TGC
Ala
>ENV003579
DQ009338
337376
Cyanobacteriota
TGC
Ala
>ENV003581
DQ009339
337376
Cyanobacteriota
TGC
Ala
>ENV003583
DQ009340
337376
Cyanobacteriota
TGC
Ala
>ENV003585
DQ009341
337376
Cyanobacteriota
TGC
Ala
>ENV003587
DQ009342
337376
Cyanobacteriota
TGC
Ala
>ENV003589
DQ009343
337376
Cyanobacteriota
TGC
Ala
>ENV003591
DQ009344
337376
Cyanobacteriota
TGC
Ala
>ENV003593
DQ009345
337376
Cyanobacteriota
TGC
Ala
>ENV003595
DQ009346
337376
Cyanobacteriota
TGC
Ala
>ENV003597
DQ009347
337376
Cyanobacteriota
TGC
Ala
>ENV003599
DQ009348
337376
Cyanobacteriota
TGC
Ala
>ENV003601
DQ009349
337376
Cyanobacteriota
TGC
Ala
>ENV003603
DQ009350
337376
Cyanobacteriota
TGC
Ala
>ENV003605
DQ009351
337376
Cyanobacteriota
TGC
Ala
>ENV003607
DQ009352
337376
Cyanobacteriota
TGC
Ala
>ENV003609
DQ009353
337376
Cyanobacteriota
TGC
Ala
>ENV003611
DQ009354
337376
Cyanobacteriota
TGC
Ala
>ENV003613
DQ009355
337376
Cyanobacteriota
TGC
Ala
>ENV003615
DQ009356
337376
Cyanobacteriota
TGC
Ala
>ENV003617
DQ009357
337376
Cyanobacteriota
TGC
Ala
>ENV003619
DQ009358
337376
Cyanobacteriota
TGC
Ala
>ENV003621
DQ009359
337376
Cyanobacteriota
TGC
Ala
>ENV003623
DQ009360
337376
Cyanobacteriota
TGC
Ala
>ENV003714
DQ009421
337376
Cyanobacteriota
TGC
Ala
>ENV003826
DQ016306
337376
Cyanobacteriota
TGC
Ala
>ENV003830
DQ016308
337376
Cyanobacteriota
TGC
Ala
>ENV003832
DQ016309
337376
Cyanobacteriota
TGC
Ala
>ENV003834
DQ016310
337376
Cyanobacteriota
TGC
Ala
>ENV003836
DQ016311
337376
Cyanobacteriota
TGC
Ala
>ENV003838
DQ016312
337376
Cyanobacteriota
TGC
Ala
>ENV003844
DQ016315
337376
Cyanobacteriota
TGC
Ala
>ENV003846
DQ016316
337376
Cyanobacteriota
TGC
Ala
>ENV003848
DQ016317
337376
Cyanobacteriota
TGC
Ala
>ENV003852
DQ016319
337376
Cyanobacteriota
TGC
Ala
>ENV003957
DQ181753
337376
Cyanobacteriota
TGC
Ala
>ENV003965
DQ181757
337376
Cyanobacteriota
TGC
Ala
>ENV004073
DQ351317
337376
Cyanobacteriota
TGC
Ala
>ENV004075
DQ351318
337376
Cyanobacteriota
TGC
Ala
>ENV004076
DQ351319
337376
Cyanobacteriota
TGC
Ala
>ENV004106
DQ366714
337376
Cyanobacteriota
TGC
Ala
>ENV004115
DQ366719
337376
Cyanobacteriota
TGC
Ala
>ENV005022
EF442203
337376
Cyanobacteriota
TGC
Ala
>ENV005024
EF442204
337376
Cyanobacteriota
TGC
Ala
>ENV005026
EF442205
337376
Cyanobacteriota
TGC
Ala
>ENV005117
EF513300
366263
Cyanobacteriota
TGC
Ala
>ENV005442
EU233393
366263
Cyanobacteriota
TGC
Ala
>ENV000549
AF547631
288544
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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