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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170203150
CEPS01028955
123265
Gammaproteobacteria
GAG
Leu
>WENV170203171
CEPS01030512
183804
Gammaproteobacteria
CAT
Met
>WENV170202740
CEPS01003502
178164
Gammaproteobacteria
GAT
Ile
>WENV170203099
CEPS01023334
328691
Gammaproteobacteria
GGT
Thr
>WENV170202777
CEPS01005792
229289
Gammaproteobacteria
TGG
Pro
>WENV170202705
CEPS01001486
13452
Gammaproteobacteria
GCT
Ser
>WENV170202790
CEPS01006790
292006
Gammaproteobacteria
TGC
Ala
>WENV170203236
CEPS01035221
74048
Gammaproteobacteria
CAA
Leu
>WENV170203761
CEPS01084143
481678
Gammaproteobacteria
GCA
Cys
>WENV170203916
CEPS01096432
182374
Gammaproteobacteria
CAT
Met
>WENV170203462
CEPS01054262
180680
Gammaproteobacteria
GAC
Val
>WENV170202789
CEPS01006790
176301
Gammaproteobacteria
GAT
Ile
>WENV170202882
CEPS01011349
180678
Gammaproteobacteria
CCG
Arg
>WENV170203987
CEPS01099544
231805
Gammaproteobacteria
CAT
Met
>WENV170203483
CEPS01056511
285547
Gammaproteobacteria
TTG
Gln
>WENV170202966
CEPS01015403
180681
Gammaproteobacteria
TGG
Pro
>WENV170203474
CEPS01055357
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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