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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180376118
OBOL01223921
145317
Gammaproteobacteria
ACG
Arg
>WENV180375444
OBOL01011078
144816
Gammaproteobacteria
TGG
Pro
>WENV180375262
OBOL01000407
240619
Gammaproteobacteria
TGT
Thr
>WENV180375812
OBOL01084960
154268
Gammaproteobacteria
ACG
Arg
>WENV180375501
OBOL01016945
245602
Gammaproteobacteria
TTT
Lys
>WENV180376095
OBOL01211061
237980
Gammaproteobacteria
GAA
Phe
>WENV180375884
OBOL01111856
239650
Gammaproteobacteria
TGT
Thr
>WENV180375762
OBOL01067533
44872
Gammaproteobacteria
GGA
Ser
>WENV180375584
OBOL01027851
411766
Gammaproteobacteria
GCA
Cys
>WENV180375313
OBOL01002083
145713
Gammaproteobacteria
CAT
Met
>WENV180375286
OBOL01001298
235886
Gammaproteobacteria
TTC
Glu
>WENV180375412
OBOL01007977
243485
Gammaproteobacteria
TGT
Thr
>WENV180375390
OBOL01006676
59485
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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