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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180976668
ODUY01192018
284044
Gammaproteobacteria
TTC
Glu
>WENV180975340
ODUY01004876
5699
Gammaproteobacteria
GCT
Ser
>WENV180975838
ODUY01025395
121754
Gammaproteobacteria
TAG
Leu
>WENV180976913
ODUY01344570
176446
Gammaproteobacteria
CAT
Met
>WENV180975172
ODUY01002326
31109
Gammaproteobacteria
GGA
Ser
>WENV180975342
ODUY01004876
184275
Gammaproteobacteria
ACG
Arg
>WENV180976428
ODUY01105385
4148
Gammaproteobacteria
>WENV180975839
ODUY01025395
401175
Gammaproteobacteria
TTG
Gln
>WENV180975840
ODUY01025395
401175
Gammaproteobacteria
TTG
Gln
>WENV180975841
ODUY01025395
401175
Gammaproteobacteria
TTG
Gln
>WENV180976004
ODUY01037481
293263
Gammaproteobacteria
CTT
Lys
>WENV180976207
ODUY01058776
4023
Gammaproteobacteria
>WENV180975253
ODUY01003587
282776
Gammaproteobacteria
GAA
Phe
>WENV180975067
ODUY01001252
76276
Gammaproteobacteria
TAA
Leu
>WENV180975385
ODUY01005614
76276
Gammaproteobacteria
TAA
Leu
>WENV180976726
ODUY01216470
176518
Gammaproteobacteria
CAT
Met
>WENV180975837
ODUY01025395
176541
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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