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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181078315
OEAS01000007
31109
Gammaproteobacteria
GGA
Ser
>WENV181078321
OEAS01000008
109178
Gammaproteobacteria
CAA
Leu
>WENV181078343
OEAS01000014
5699
Gammaproteobacteria
GCT
Ser
>WENV181078427
OEAS01000062
121754
Gammaproteobacteria
TAG
Leu
>WENV181078548
OEAS01000130
29761
Gammaproteobacteria
TGA
Ser
>WENV181079270
OEAS01003994
4023
Gammaproteobacteria
>WENV181079409
OEAS01005972
4148
Gammaproteobacteria
>WENV181079747
OEAS01013353
4148
Gammaproteobacteria
>WENV181079786
OEAS01014848
238652
Gammaproteobacteria
CAT
Met
>WENV181079810
OEAS01015607
178974
Gammaproteobacteria
GAC
Val
>WENV181079837
OEAS01016467
178975
Gammaproteobacteria
CTT
Lys
>WENV181080175
OEAS01030571
176446
Gammaproteobacteria
CAT
Met
>WENV181080383
OEAS01044277
178974
Gammaproteobacteria
GAC
Val
>WENV181080427
OEAS01046934
238652
Gammaproteobacteria
CAT
Met
>WENV181080574
OEAS01058518
4148
Gammaproteobacteria
>WENV181080631
OEAS01063776
238652
Gammaproteobacteria
CAT
Met
>WENV181080830
OEAS01087240
238652
Gammaproteobacteria
CAT
Met
>WENV181080912
OEAS01097111
284044
Gammaproteobacteria
TTC
Glu
>WENV181080913
OEAS01097111
284044
Gammaproteobacteria
TTC
Glu
>WENV181080995
OEAS01111858
178974
Gammaproteobacteria
GAC
Val
>WENV181081054
OEAS01120384
73103
Gammaproteobacteria
TAA
Leu
>WENV181081101
OEAS01128609
178975
Gammaproteobacteria
CTT
Lys
>WENV181081818
OEAS01399214
127466
Gammaproteobacteria
TAG
Leu
>WENV181082054
OEAS01559286
401175
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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