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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183698864
OZSS01005972
145317
Gammaproteobacteria
ACG
Arg
>WENV183699044
OZSS01010482
145317
Gammaproteobacteria
ACG
Arg
>WENV183699092
OZSS01011798
145317
Gammaproteobacteria
ACG
Arg
>WENV183699022
OZSS01009808
146662
Gammaproteobacteria
GAC
Val
>WENV183699583
OZSS01034440
185151
Gammaproteobacteria
TCT
Arg
>WENV183699879
OZSS01062453
238370
Gammaproteobacteria
TTT
Lys
>WENV183700269
OZSS01150612
236480
Gammaproteobacteria
GTG
His
>WENV183699258
OZSS01018190
17426
Gammaproteobacteria
GCT
Ser
>WENV183699136
OZSS01013352
244202
Gammaproteobacteria
TTT
Lys
>WENV183699037
OZSS01010391
244202
Gammaproteobacteria
TTT
Lys
>WENV183698999
OZSS01009165
171935
Gammaproteobacteria
ACG
Arg
>WENV183699478
OZSS01028435
46594
Gammaproteobacteria
GGA
Ser
>WENV183699117
OZSS01012637
46594
Gammaproteobacteria
GGA
Ser
>WENV183700360
OZSS01201552
99112
Gammaproteobacteria
TAG
Leu
>WENV183700166
OZSS01115785
154268
Gammaproteobacteria
ACG
Arg
>WENV183698232
OZSS01000156
240642
Gammaproteobacteria
GTT
Asn
>WENV183700153
OZSS01112306
245602
Gammaproteobacteria
TTT
Lys
>WENV183699287
OZSS01019493
148148
Gammaproteobacteria
GAC
Val
>WENV183700268
OZSS01150263
241478
Gammaproteobacteria
TGT
Thr
>WENV183698178
OZSS01000060
260238
Gammaproteobacteria
>WENV183699508
OZSS01029554
252289
Gammaproteobacteria
TTT
Lys
>WENV183698599
OZSS01002183
421020
Gammaproteobacteria
GCA
Cys
>WENV183699930
OZSS01068475
279218
Gammaproteobacteria
TTC
Glu
>WENV183699600
OZSS01035437
238510
Gammaproteobacteria
GCC
Gly
>WENV183699413
OZSS01025121
412476
Gammaproteobacteria
TCC
Gly
>WENV183699728
OZSS01046785
278793
Gammaproteobacteria
GTG
His
>WENV183698334
OZSS01000510
236248
Gammaproteobacteria
TTT
Lys
>WENV183699196
OZSS01015597
186449
Gammaproteobacteria
TGG
Pro
>WENV183698322
OZSS01000454
186449
Gammaproteobacteria
TGG
Pro
>WENV183699411
OZSS01025121
237421
Gammaproteobacteria
TGT
Thr
>WENV183699144
OZSS01013573
163882
Gammaproteobacteria
GAC
Val
>WENV183699043
OZSS01010458
247088
Gammaproteobacteria
CCA
Trp
>WENV183698898
OZSS01006647
247088
Gammaproteobacteria
CCA
Trp
>WENV183699442
OZSS01026251
266766
Gammaproteobacteria
TGT
Thr
>WENV183698224
OZSS01000145
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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