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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183733232
PJTY01000396
23711
Gammaproteobacteria
GGA
Ser
>WENV183733288
PJTY01000684
23711
Gammaproteobacteria
GGA
Ser
>WENV183733312
PJTY01000870
7214
Gammaproteobacteria
GCT
Ser
>WENV183733274
PJTY01000635
188516
Gammaproteobacteria
CAT
Met
>WENV183733275
PJTY01000635
188516
Gammaproteobacteria
CAT
Met
>WENV183733276
PJTY01000635
188516
Gammaproteobacteria
CAT
Met
>WENV183733345
PJTY01001260
188516
Gammaproteobacteria
CAT
Met
>WENV183733346
PJTY01001260
188516
Gammaproteobacteria
CAT
Met
>WENV183733488
PJTY01002734
188516
Gammaproteobacteria
CAT
Met
>WENV183733565
PJTY01004861
188516
Gammaproteobacteria
CAT
Met
>WENV183733848
PJTY01037341
188516
Gammaproteobacteria
CAT
Met
>WENV183733849
PJTY01037341
188516
Gammaproteobacteria
CAT
Met
>WENV183733160
PJTY01000156
144827
Gammaproteobacteria
GAC
Val
>WENV183733485
PJTY01002714
144827
Gammaproteobacteria
GAC
Val
>WENV183733379
PJTY01001436
412176
Gammaproteobacteria
CCC
Gly
>WENV183733228
PJTY01000385
51143
Gammaproteobacteria
TGA
Ser
>WENV183733263
PJTY01000539
51143
Gammaproteobacteria
TGA
Ser
>WENV183733289
PJTY01000697
16446
Gammaproteobacteria
GCT
Ser
>WENV183733113
PJTY01000079
16446
Gammaproteobacteria
GCT
Ser
>WENV183733316
PJTY01001001
279806
Gammaproteobacteria
TGT
Thr
>WENV183733313
PJTY01000968
279806
Gammaproteobacteria
TGT
Thr
>WENV183733429
PJTY01002015
292044
Gammaproteobacteria
GTG
His
>WENV183733607
PJTY01006440
182303
Gammaproteobacteria
GTG
His
>WENV183733321
PJTY01001022
266908
Gammaproteobacteria
CGC
Ala
>WENV183733428
PJTY01002003
238307
Gammaproteobacteria
GAA
Phe
>WENV183733425
PJTY01001941
238307
Gammaproteobacteria
GAA
Phe
>WENV183733240
PJTY01000405
371820
Gammaproteobacteria
>WENV183733239
PJTY01000405
371820
Gammaproteobacteria
>WENV183733198
PJTY01000234
96066
Gammaproteobacteria
TAA
Leu
>WENV183733156
PJTY01000136
96066
Gammaproteobacteria
TAA
Leu
>WENV183733054
PJTY01000032
191498
Gammaproteobacteria
CAT
Met
>WENV183733118
PJTY01000079
338337
Gammaproteobacteria
CCT
Arg
>WENV183733292
PJTY01000697
165964
Gammaproteobacteria
ACG
Arg
>WENV183733291
PJTY01000697
165964
Gammaproteobacteria
ACG
Arg
>WENV183733117
PJTY01000079
165964
Gammaproteobacteria
ACG
Arg
>WENV183733116
PJTY01000079
165964
Gammaproteobacteria
ACG
Arg
>WENV183733115
PJTY01000079
165964
Gammaproteobacteria
ACG
Arg
>WENV183733114
PJTY01000079
165964
Gammaproteobacteria
ACG
Arg
>WENV183733293
PJTY01000697
147595
Gammaproteobacteria
CCT
Arg
>WENV183733550
PJTY01004372
353410
Gammaproteobacteria
CTG
Gln
>WENV183733388
PJTY01001497
16238
Gammaproteobacteria
CGA
Ser
>WENV183733066
PJTY01000040
95603
Gammaproteobacteria
TAG
Leu
>WENV183733064
PJTY01000040
95603
Gammaproteobacteria
TAG
Leu
>WENV183733068
PJTY01000040
152286
Gammaproteobacteria
GAC
Val
>WENV183733331
PJTY01001141
145334
Gammaproteobacteria
CCG
Arg
>WENV183733213
PJTY01000290
145334
Gammaproteobacteria
CCG
Arg
>WENV183733824
PJTY01032093
96065
Gammaproteobacteria
TAG
Leu
>WENV183733678
PJTY01011212
96065
Gammaproteobacteria
TAG
Leu
>WENV183733629
PJTY01008041
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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