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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734312
PJTZ01001690
23711
Gammaproteobacteria
GGA
Ser
>WENV183734705
PJTZ01046519
23711
Gammaproteobacteria
GGA
Ser
>WENV183734082
PJTZ01000042
7214
Gammaproteobacteria
GCT
Ser
>WENV183733934
PJTZ01000004
412176
Gammaproteobacteria
CCC
Gly
>WENV183734325
PJTZ01002186
51143
Gammaproteobacteria
TGA
Ser
>WENV183734374
PJTZ01003656
51143
Gammaproteobacteria
TGA
Ser
>WENV183734433
PJTZ01007344
16446
Gammaproteobacteria
GCT
Ser
>WENV183734534
PJTZ01015843
16446
Gammaproteobacteria
GCT
Ser
>WENV183734252
PJTZ01000485
279806
Gammaproteobacteria
TGT
Thr
>WENV183734455
PJTZ01008218
307499
Gammaproteobacteria
GAA
Phe
>WENV183734454
PJTZ01008218
307499
Gammaproteobacteria
GAA
Phe
>WENV183733930
PJTZ01000003
182303
Gammaproteobacteria
GTG
His
>WENV183734080
PJTZ01000041
266908
Gammaproteobacteria
CGC
Ala
>WENV183734473
PJTZ01009244
238307
Gammaproteobacteria
GAA
Phe
>WENV183734572
PJTZ01019465
96066
Gammaproteobacteria
TAA
Leu
>WENV183734406
PJTZ01006130
96066
Gammaproteobacteria
TAA
Leu
>WENV183734516
PJTZ01013623
309243
Gammaproteobacteria
GTT
Asn
>WENV183734515
PJTZ01013623
309243
Gammaproteobacteria
GTT
Asn
>WENV183734464
PJTZ01008589
309243
Gammaproteobacteria
GTT
Asn
>WENV183734555
PJTZ01017755
191498
Gammaproteobacteria
CAT
Met
>WENV183734330
PJTZ01002380
338337
Gammaproteobacteria
CCT
Arg
>WENV183734588
PJTZ01021102
165964
Gammaproteobacteria
ACG
Arg
>WENV183734587
PJTZ01021102
165964
Gammaproteobacteria
ACG
Arg
>WENV183734586
PJTZ01021102
165964
Gammaproteobacteria
ACG
Arg
>WENV183734435
PJTZ01007344
165964
Gammaproteobacteria
ACG
Arg
>WENV183734347
PJTZ01002882
165964
Gammaproteobacteria
ACG
Arg
>WENV183734440
PJTZ01007613
147595
Gammaproteobacteria
CCT
Arg
>WENV183733933
PJTZ01000004
353410
Gammaproteobacteria
CTG
Gln
>WENV183733923
PJTZ01000003
16238
Gammaproteobacteria
CGA
Ser
>WENV183734471
PJTZ01009096
152286
Gammaproteobacteria
GAC
Val
>WENV183734279
PJTZ01000951
145334
Gammaproteobacteria
CCG
Arg
>WENV183734663
PJTZ01033879
96065
Gammaproteobacteria
TAG
Leu
>WENV183734503
PJTZ01012997
96065
Gammaproteobacteria
TAG
Leu
>WENV183734491
PJTZ01010802
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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