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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036003
CDYN01001716
406043
Verrucomicrobiota
GCA
Cys
>WENV170036421
CDYN01014255
293125
Verrucomicrobiota
GAA
Phe
>WENV170036646
CDYN01020068
293125
Verrucomicrobiota
GAA
Phe
>WENV170036640
CDYN01020068
148006
Verrucomicrobiota
CAA
Leu
>WENV170036001
CDYN01001716
293105
Verrucomicrobiota
CAT
Met
>WENV170036379
CDYN01012934
405901
Verrucomicrobiota
GCC
Gly
>WENV170036546
CDYN01017539
405901
Verrucomicrobiota
GCC
Gly
>WENV170036424
CDYN01014255
483642
Verrucomicrobiota
CCC
Gly
>WENV170036643
CDYN01020068
483642
Verrucomicrobiota
CCC
Gly
>WENV170036184
CDYN01007531
229220
Verrucomicrobiota
CAT
Met
>WENV170036240
CDYN01008842
157427
Verrucomicrobiota
GTC
Asp
>WENV170036591
CDYN01018625
157427
Verrucomicrobiota
GTC
Asp
>WENV170036445
CDYN01014623
293079
Verrucomicrobiota
CGC
Ala
>WENV170036641
CDYN01020068
120352
Verrucomicrobiota
TAG
Leu
>WENV170036420
CDYN01014255
489412
Verrucomicrobiota
TCC
Gly
>WENV170036645
CDYN01020068
489412
Verrucomicrobiota
TCC
Gly
>WENV170035997
CDYN01001716
293069
Verrucomicrobiota
CTT
Lys
>WENV170035998
CDYN01001716
293069
Verrucomicrobiota
CTT
Lys
>WENV170036648
CDYN01020068
406336
Verrucomicrobiota
CCT
Arg
>WENV170036425
CDYN01014255
406369
Verrucomicrobiota
CCG
Arg
>WENV170036644
CDYN01020068
406369
Verrucomicrobiota
CCG
Arg
>WENV170036539
CDYN01017372
405940
Verrucomicrobiota
GGT
Thr
>WENV170036115
CDYN01005183
406044
Verrucomicrobiota
CTG
Gln
>WENV170036423
CDYN01014255
187556
Verrucomicrobiota
GGG
Pro
>WENV170036642
CDYN01020068
187556
Verrucomicrobiota
GGG
Pro
>WENV170036000
CDYN01001716
406037
Verrucomicrobiota
GTG
His
>WENV170036544
CDYN01017539
406360
Verrucomicrobiota
GAC
Val
>WENV170036010
CDYN01001851
187548
Verrucomicrobiota
TCT
Arg
>WENV170035996
CDYN01001716
406040
Verrucomicrobiota
CGT
Thr
>WENV170036545
CDYN01017539
57652
Verrucomicrobiota
TGA
Ser
>WENV170036614
CDYN01019176
406039
Verrucomicrobiota
CAC
Val
>WENV170036141
CDYN01005726
406368
Verrucomicrobiota
TTG
Gln
>WENV170035974
CDYN01001110
101461
Verrucomicrobiota
GTA
Tyr
>WENV170036590
CDYN01018625
293095
Verrucomicrobiota
TTT
Lys
>WENV170036189
CDYN01007739
187561
Verrucomicrobiota
CGG
Pro
>WENV170036547
CDYN01017539
406342
Verrucomicrobiota
CAT
Met
>WENV170035973
CDYN01001110
406351
Verrucomicrobiota
GTT
Asn
>WENV170036140
CDYN01005726
303305
Verrucomicrobiota
GGC
Ala
>WENV170035981
CDYN01001184
8938
Verrucomicrobiota
GCT
Ser
>WENV170036422
CDYN01014255
186928
Verrucomicrobiota
TGG
Pro
>WENV170036647
CDYN01020068
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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