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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053461
CDZD01028421
406043
Verrucomicrobiota
GCA
Cys
>WENV170053778
CDZD01043516
406043
Verrucomicrobiota
GCA
Cys
>WENV170053919
CDZD01050489
406043
Verrucomicrobiota
GCA
Cys
>WENV170053112
CDZD01006407
293125
Verrucomicrobiota
GAA
Phe
>WENV170053463
CDZD01028421
406350
Verrucomicrobiota
TGT
Thr
>WENV170053780
CDZD01043516
406350
Verrucomicrobiota
TGT
Thr
>WENV170053474
CDZD01029074
148006
Verrucomicrobiota
CAA
Leu
>WENV170053855
CDZD01048024
148006
Verrucomicrobiota
CAA
Leu
>WENV170053292
CDZD01019382
293105
Verrucomicrobiota
CAT
Met
>WENV170053289
CDZD01019382
405901
Verrucomicrobiota
GCC
Gly
>WENV170053497
CDZD01030465
405901
Verrucomicrobiota
GCC
Gly
>WENV170053109
CDZD01006407
483642
Verrucomicrobiota
CCC
Gly
>WENV170053016
CDZD01002217
8960
Verrucomicrobiota
CGA
Ser
>WENV170053470
CDZD01029074
101463
Verrucomicrobiota
TAA
Leu
>WENV170053856
CDZD01048024
101463
Verrucomicrobiota
TAA
Leu
>WENV170053481
CDZD01029574
157427
Verrucomicrobiota
GTC
Asp
>WENV170053660
CDZD01038322
157427
Verrucomicrobiota
GTC
Asp
>WENV170053464
CDZD01028421
293079
Verrucomicrobiota
CGC
Ala
>WENV170053781
CDZD01043516
293079
Verrucomicrobiota
CGC
Ala
>WENV170053872
CDZD01048622
120352
Verrucomicrobiota
TAG
Leu
>WENV170053471
CDZD01029074
292636
Verrucomicrobiota
>WENV170053857
CDZD01048024
292636
Verrucomicrobiota
>WENV170053565
CDZD01033469
293069
Verrucomicrobiota
CTT
Lys
>WENV170053566
CDZD01033469
293069
Verrucomicrobiota
CTT
Lys
>WENV170053639
CDZD01037359
406336
Verrucomicrobiota
CCT
Arg
>WENV170053110
CDZD01006407
406369
Verrucomicrobiota
CCG
Arg
>WENV170053921
CDZD01050489
405940
Verrucomicrobiota
GGT
Thr
>WENV170053711
CDZD01040366
406044
Verrucomicrobiota
CTG
Gln
>WENV170053108
CDZD01006407
187556
Verrucomicrobiota
GGG
Pro
>WENV170053291
CDZD01019382
406037
Verrucomicrobiota
GTG
His
>WENV170053480
CDZD01029574
406360
Verrucomicrobiota
GAC
Val
>WENV170053614
CDZD01036107
187548
Verrucomicrobiota
TCT
Arg
>WENV170053564
CDZD01033469
406040
Verrucomicrobiota
CGT
Thr
>WENV170053653
CDZD01037846
57652
Verrucomicrobiota
TGA
Ser
>WENV170053709
CDZD01040366
406039
Verrucomicrobiota
CAC
Val
>WENV170053923
CDZD01050489
75458
Verrucomicrobiota
CAG
Leu
>WENV170053710
CDZD01040366
406368
Verrucomicrobiota
TTG
Gln
>WENV170053028
CDZD01003073
101461
Verrucomicrobiota
GTA
Tyr
>WENV170053633
CDZD01036893
293095
Verrucomicrobiota
TTT
Lys
>WENV170053567
CDZD01033469
187561
Verrucomicrobiota
CGG
Pro
>WENV170053288
CDZD01019382
406342
Verrucomicrobiota
CAT
Met
>WENV170053263
CDZD01018284
406351
Verrucomicrobiota
GTT
Asn
>WENV170053115
CDZD01006428
406346
Verrucomicrobiota
TAC
Val
>WENV170053858
CDZD01048024
8938
Verrucomicrobiota
GCT
Ser
>WENV170053472
CDZD01029074
8938
Verrucomicrobiota
GCT
Ser
>WENV170053113
CDZD01006407
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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