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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068272
CDZP01000336
406342
Verrucomicrobiota
CAT
Met
>WENV170068273
CDZP01000336
57652
Verrucomicrobiota
TGA
Ser
>WENV170068274
CDZP01000336
405901
Verrucomicrobiota
GCC
Gly
>WENV170068275
CDZP01000336
298263
Verrucomicrobiota
TTC
Glu
>WENV170068276
CDZP01000336
406037
Verrucomicrobiota
GTG
His
>WENV170068277
CDZP01000336
293105
Verrucomicrobiota
CAT
Met
>WENV170068328
CDZP01002688
489412
Verrucomicrobiota
TCC
Gly
>WENV170068329
CDZP01002688
483642
Verrucomicrobiota
CCC
Gly
>WENV170068346
CDZP01003472
406044
Verrucomicrobiota
CTG
Gln
>WENV170068347
CDZP01003472
157427
Verrucomicrobiota
GTC
Asp
>WENV170068481
CDZP01008245
187561
Verrucomicrobiota
CGG
Pro
>WENV170068482
CDZP01008252
157427
Verrucomicrobiota
GTC
Asp
>WENV170068483
CDZP01008252
293095
Verrucomicrobiota
TTT
Lys
>WENV170068484
CDZP01008252
187548
Verrucomicrobiota
TCT
Arg
>WENV170068491
CDZP01008618
187561
Verrucomicrobiota
CGG
Pro
>WENV170068554
CDZP01011650
75458
Verrucomicrobiota
CAG
Leu
>WENV170068707
CDZP01015833
406369
Verrucomicrobiota
CCG
Arg
>WENV170068739
CDZP01017485
303305
Verrucomicrobiota
GGC
Ala
>WENV170068740
CDZP01017485
406039
Verrucomicrobiota
CAC
Val
>WENV170068741
CDZP01017485
405901
Verrucomicrobiota
GCC
Gly
>WENV170068742
CDZP01017485
406368
Verrucomicrobiota
TTG
Gln
>WENV170068807
CDZP01019951
8960
Verrucomicrobiota
CGA
Ser
>WENV170068831
CDZP01020472
229220
Verrucomicrobiota
CAT
Met
>WENV170068899
CDZP01023791
293125
Verrucomicrobiota
GAA
Phe
>WENV170068900
CDZP01023791
186928
Verrucomicrobiota
TGG
Pro
>WENV170068901
CDZP01023791
406336
Verrucomicrobiota
CCT
Arg
>WENV170068902
CDZP01023791
120352
Verrucomicrobiota
TAG
Leu
>WENV170068903
CDZP01023791
187556
Verrucomicrobiota
GGG
Pro
>WENV170068952
CDZP01026003
406336
Verrucomicrobiota
CCT
Arg
>WENV170068953
CDZP01026003
101463
Verrucomicrobiota
TAA
Leu
>WENV170068954
CDZP01026003
292636
Verrucomicrobiota
>WENV170068955
CDZP01026003
8938
Verrucomicrobiota
GCT
Ser
>WENV170068956
CDZP01026003
406351
Verrucomicrobiota
GTT
Asn
>WENV170068957
CDZP01026003
101461
Verrucomicrobiota
GTA
Tyr
>WENV170068958
CDZP01026003
21159
Verrucomicrobiota
GGA
Ser
>WENV170068959
CDZP01026003
229220
Verrucomicrobiota
CAT
Met
>WENV170068961
CDZP01026003
148006
Verrucomicrobiota
CAA
Leu
>WENV170068962
CDZP01026003
120352
Verrucomicrobiota
TAG
Leu
>WENV170069029
CDZP01028778
101600
Verrucomicrobiota
AAG
Leu
>WENV170069030
CDZP01028778
406043
Verrucomicrobiota
GCA
Cys
>WENV170069031
CDZP01028778
298263
Verrucomicrobiota
TTC
Glu
>WENV170069032
CDZP01028778
406350
Verrucomicrobiota
TGT
Thr
>WENV170069033
CDZP01028778
293079
Verrucomicrobiota
CGC
Ala
>WENV170069319
CDZP01038899
406346
Verrucomicrobiota
TAC
Val
>WENV170069320
CDZP01038899
406360
Verrucomicrobiota
GAC
Val
>WENV170069459
CDZP01043661
405940
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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