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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180179053
OAWJ01000233
292636
Verrucomicrobiota
>WENV180179534
OAWJ01002446
148006
Verrucomicrobiota
CAA
Leu
>WENV180179040
OAWJ01000220
406039
Verrucomicrobiota
CAC
Val
>WENV180178920
OAWJ01000107
75458
Verrucomicrobiota
CAG
Leu
>WENV180178896
OAWJ01000072
293105
Verrucomicrobiota
CAT
Met
>WENV180178961
OAWJ01000149
229220
Verrucomicrobiota
CAT
Met
>WENV180178892
OAWJ01000072
406342
Verrucomicrobiota
CAT
Met
>WENV180179420
OAWJ01001378
483642
Verrucomicrobiota
CCC
Gly
>WENV180179236
OAWJ01000605
406369
Verrucomicrobiota
CCG
Arg
>WENV180179006
OAWJ01000187
406336
Verrucomicrobiota
CCT
Arg
>WENV180179577
OAWJ01002919
8960
Verrucomicrobiota
CGA
Ser
>WENV180179374
OAWJ01001100
293079
Verrucomicrobiota
CGC
Ala
>WENV180179253
OAWJ01000654
187561
Verrucomicrobiota
CGG
Pro
>WENV180179440
OAWJ01001492
406040
Verrucomicrobiota
CGT
Thr
>WENV180179351
OAWJ01000991
406044
Verrucomicrobiota
CTG
Gln
>WENV180179441
OAWJ01001492
293069
Verrucomicrobiota
CTT
Lys
>WENV180179442
OAWJ01001492
293069
Verrucomicrobiota
CTT
Lys
>WENV180179085
OAWJ01000283
293125
Verrucomicrobiota
GAA
Phe
>WENV180179498
OAWJ01001932
406360
Verrucomicrobiota
GAC
Val
>WENV180178893
OAWJ01000072
405901
Verrucomicrobiota
GCC
Gly
>WENV180179393
OAWJ01001170
405901
Verrucomicrobiota
GCC
Gly
>WENV180179054
OAWJ01000233
8938
Verrucomicrobiota
GCT
Ser
>WENV180179296
OAWJ01000775
187556
Verrucomicrobiota
GGG
Pro
>WENV180178980
OAWJ01000161
405940
Verrucomicrobiota
GGT
Thr
>WENV180179468
OAWJ01001675
101461
Verrucomicrobiota
GTA
Tyr
>WENV180179204
OAWJ01000515
157427
Verrucomicrobiota
GTC
Asp
>WENV180179279
OAWJ01000731
157427
Verrucomicrobiota
GTC
Asp
>WENV180178895
OAWJ01000072
406037
Verrucomicrobiota
GTG
His
>WENV180179402
OAWJ01001237
406351
Verrucomicrobiota
GTT
Asn
>WENV180179052
OAWJ01000233
101463
Verrucomicrobiota
TAA
Leu
>WENV180179443
OAWJ01001515
406346
Verrucomicrobiota
TAC
Val
>WENV180179091
OAWJ01000294
120352
Verrucomicrobiota
TAG
Leu
>WENV180179161
OAWJ01000426
187548
Verrucomicrobiota
TCT
Arg
>WENV180179342
OAWJ01000944
57652
Verrucomicrobiota
TGA
Ser
>WENV180179086
OAWJ01000283
186928
Verrucomicrobiota
TGG
Pro
>WENV180179546
OAWJ01002591
406350
Verrucomicrobiota
TGT
Thr
>WENV180178957
OAWJ01000143
406368
Verrucomicrobiota
TTG
Gln
>WENV180179129
OAWJ01000335
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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