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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181445745
OGDS01014006
246260
Verrucomicrobiota
>WENV181445470
OGDS01004491
82181
Verrucomicrobiota
AAG
Leu
>WENV181445447
OGDS01004057
119661
Verrucomicrobiota
CAA
Leu
>WENV181445441
OGDS01003954
344841
Verrucomicrobiota
CAC
Val
>WENV181445067
OGDS01000597
60880
Verrucomicrobiota
CAG
Leu
>WENV181445563
OGDS01006501
170105
Verrucomicrobiota
CAT
Met
>WENV181445528
OGDS01005352
246709
Verrucomicrobiota
CAT
Met
>WENV181445237
OGDS01001469
287733
Verrucomicrobiota
CCA
Trp
>WENV181445932
OGDS01030859
414625
Verrucomicrobiota
CCC
Gly
>WENV181445674
OGDS01010540
345142
Verrucomicrobiota
CCG
Arg
>WENV181445917
OGDS01028743
345110
Verrucomicrobiota
CCT
Arg
>WENV181445320
OGDS01002124
7274
Verrucomicrobiota
CGA
Ser
>WENV181445414
OGDS01003117
246687
Verrucomicrobiota
CGC
Ala
>WENV181445393
OGDS01002894
155268
Verrucomicrobiota
CGG
Pro
>WENV181445899
OGDS01026249
344845
Verrucomicrobiota
CTG
Gln
>WENV181445981
OGDS01037337
246677
Verrucomicrobiota
CTT
Lys
>WENV181445766
OGDS01014870
246728
Verrucomicrobiota
GAA
Phe
>WENV181445439
OGDS01003904
345133
Verrucomicrobiota
GAC
Val
>WENV181445346
OGDS01002369
344844
Verrucomicrobiota
GCA
Cys
>WENV181445460
OGDS01004259
368497
Verrucomicrobiota
GCC
Gly
>WENV181445642
OGDS01009262
7256
Verrucomicrobiota
GCT
Ser
>WENV181445221
OGDS01001372
17023
Verrucomicrobiota
GGA
Ser
>WENV181445582
OGDS01007093
155264
Verrucomicrobiota
GGG
Pro
>WENV181445880
OGDS01023952
344751
Verrucomicrobiota
GGT
Thr
>WENV181445333
OGDS01002315
82054
Verrucomicrobiota
GTA
Tyr
>WENV181445559
OGDS01006340
128202
Verrucomicrobiota
GTC
Asp
>WENV181445527
OGDS01005352
344839
Verrucomicrobiota
GTG
His
>WENV181445459
OGDS01004257
345124
Verrucomicrobiota
GTT
Asn
>WENV181445744
OGDS01014006
82056
Verrucomicrobiota
TAA
Leu
>WENV181445649
OGDS01009820
345119
Verrucomicrobiota
TAC
Val
>WENV181445378
OGDS01002655
97755
Verrucomicrobiota
TAG
Leu
>WENV181445933
OGDS01030859
419909
Verrucomicrobiota
TCC
Gly
>WENV181445555
OGDS01006185
155256
Verrucomicrobiota
TCT
Arg
>WENV181445767
OGDS01014870
154693
Verrucomicrobiota
TGG
Pro
>WENV181445740
OGDS01013795
345123
Verrucomicrobiota
TGT
Thr
>WENV181445379
OGDS01002689
246700
Verrucomicrobiota
TTC
Glu
>WENV181445383
OGDS01002731
345141
Verrucomicrobiota
TTG
Gln
>WENV181445574
OGDS01006885
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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