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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181797383
OGRU01003410
406351
Verrucomicrobiota
GTT
Asn
>WENV181797390
OGRU01003476
187548
Verrucomicrobiota
TCT
Arg
>WENV181797545
OGRU01006354
406350
Verrucomicrobiota
TGT
Thr
>WENV181797580
OGRU01007170
75458
Verrucomicrobiota
CAG
Leu
>WENV181797603
OGRU01007584
57652
Verrucomicrobiota
TGA
Ser
>WENV181797643
OGRU01008523
120352
Verrucomicrobiota
TAG
Leu
>WENV181797654
OGRU01008828
229220
Verrucomicrobiota
CAT
Met
>WENV181797664
OGRU01009272
293079
Verrucomicrobiota
CGC
Ala
>WENV181797772
OGRU01012754
148006
Verrucomicrobiota
CAA
Leu
>WENV181797774
OGRU01012860
406360
Verrucomicrobiota
GAC
Val
>WENV181797806
OGRU01014718
405940
Verrucomicrobiota
GGT
Thr
>WENV181797813
OGRU01015399
293125
Verrucomicrobiota
GAA
Phe
>WENV181797840
OGRU01016561
405901
Verrucomicrobiota
GCC
Gly
>WENV181797863
OGRU01017535
293095
Verrucomicrobiota
TTT
Lys
>WENV181797873
OGRU01018439
406037
Verrucomicrobiota
GTG
His
>WENV181797895
OGRU01019381
406043
Verrucomicrobiota
GCA
Cys
>WENV181797924
OGRU01021585
298263
Verrucomicrobiota
TTC
Glu
>WENV181797926
OGRU01021645
406368
Verrucomicrobiota
TTG
Gln
>WENV181797937
OGRU01022682
406336
Verrucomicrobiota
CCT
Arg
>WENV181797949
OGRU01023634
157427
Verrucomicrobiota
GTC
Asp
>WENV181797972
OGRU01025928
293105
Verrucomicrobiota
CAT
Met
>WENV181797977
OGRU01026637
303305
Verrucomicrobiota
GGC
Ala
>WENV181798001
OGRU01029223
406369
Verrucomicrobiota
CCG
Arg
>WENV181798003
OGRU01029536
101461
Verrucomicrobiota
GTA
Tyr
>WENV181798028
OGRU01033152
101600
Verrucomicrobiota
AAG
Leu
>WENV181798068
OGRU01042370
292636
Verrucomicrobiota
>WENV181798069
OGRU01042507
406346
Verrucomicrobiota
TAC
Val
>WENV181798076
OGRU01043974
8960
Verrucomicrobiota
CGA
Ser
>WENV181798108
OGRU01050573
406039
Verrucomicrobiota
CAC
Val
>WENV181798213
OGRU01079376
293069
Verrucomicrobiota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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