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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182010586
OHBL01000041
292636
Verrucomicrobiota
>WENV182010584
OHBL01000041
148006
Verrucomicrobiota
CAA
Leu
>WENV182010663
OHBL01000334
406039
Verrucomicrobiota
CAC
Val
>WENV182010670
OHBL01000390
75458
Verrucomicrobiota
CAG
Leu
>WENV182010677
OHBL01000438
293105
Verrucomicrobiota
CAT
Met
>WENV182010762
OHBL01001775
229220
Verrucomicrobiota
CAT
Met
>WENV182010717
OHBL01000936
406342
Verrucomicrobiota
CAT
Met
>WENV182010649
OHBL01000253
483642
Verrucomicrobiota
CCC
Gly
>WENV182010600
OHBL01000069
406369
Verrucomicrobiota
CCG
Arg
>WENV182010615
OHBL01000129
406336
Verrucomicrobiota
CCT
Arg
>WENV182010628
OHBL01000138
8960
Verrucomicrobiota
CGA
Ser
>WENV182010634
OHBL01000157
293079
Verrucomicrobiota
CGC
Ala
>WENV182010643
OHBL01000195
187561
Verrucomicrobiota
CGG
Pro
>WENV182010641
OHBL01000195
406040
Verrucomicrobiota
CGT
Thr
>WENV182010874
OHBL01007685
406044
Verrucomicrobiota
CTG
Gln
>WENV182010642
OHBL01000195
293069
Verrucomicrobiota
CTT
Lys
>WENV182010745
OHBL01001360
293125
Verrucomicrobiota
GAA
Phe
>WENV182010612
OHBL01000123
406360
Verrucomicrobiota
GAC
Val
>WENV182010852
OHBL01005629
406043
Verrucomicrobiota
GCA
Cys
>WENV182010679
OHBL01000479
405901
Verrucomicrobiota
GCC
Gly
>WENV182010720
OHBL01000974
405901
Verrucomicrobiota
GCC
Gly
>WENV182010587
OHBL01000041
8938
Verrucomicrobiota
GCT
Ser
>WENV182010640
OHBL01000189
21159
Verrucomicrobiota
GGA
Ser
>WENV182010706
OHBL01000803
303305
Verrucomicrobiota
GGC
Ala
>WENV182010682
OHBL01000510
187556
Verrucomicrobiota
GGG
Pro
>WENV182010567
OHBL01000021
405940
Verrucomicrobiota
GGT
Thr
>WENV182010648
OHBL01000238
101461
Verrucomicrobiota
GTA
Tyr
>WENV182010718
OHBL01000951
157427
Verrucomicrobiota
GTC
Asp
>WENV182010676
OHBL01000438
406037
Verrucomicrobiota
GTG
His
>WENV182010669
OHBL01000366
406351
Verrucomicrobiota
GTT
Asn
>WENV182010585
OHBL01000041
101463
Verrucomicrobiota
TAA
Leu
>WENV182010768
OHBL01001860
406346
Verrucomicrobiota
TAC
Val
>WENV182010673
OHBL01000430
120352
Verrucomicrobiota
TAG
Leu
>WENV182010650
OHBL01000253
507474
Verrucomicrobiota
TCC
Gly
>WENV182010686
OHBL01000552
187548
Verrucomicrobiota
TCT
Arg
>WENV182010730
OHBL01001099
57652
Verrucomicrobiota
TGA
Ser
>WENV182010746
OHBL01001360
186928
Verrucomicrobiota
TGG
Pro
>WENV182010708
OHBL01000817
406350
Verrucomicrobiota
TGT
Thr
>WENV182010602
OHBL01000074
298263
Verrucomicrobiota
TTC
Glu
>WENV182010603
OHBL01000074
298263
Verrucomicrobiota
TTC
Glu
>WENV182010675
OHBL01000438
298263
Verrucomicrobiota
TTC
Glu
>WENV182010775
OHBL01001895
406368
Verrucomicrobiota
TTG
Gln
>WENV182010684
OHBL01000531
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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