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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182285449
OHVN01002990
148006
Verrucomicrobiota
CAA
Leu
>WENV182285679
OHVN01029160
101600
Verrucomicrobiota
AAG
Leu
>WENV182285464
OHVN01003345
293105
Verrucomicrobiota
CAT
Met
>WENV182285693
OHVN01033194
405901
Verrucomicrobiota
GCC
Gly
>WENV182285484
OHVN01004350
483642
Verrucomicrobiota
CCC
Gly
>WENV182285420
OHVN01002147
8960
Verrucomicrobiota
CGA
Ser
>WENV182285630
OHVN01019040
101463
Verrucomicrobiota
TAA
Leu
>WENV182285435
OHVN01002678
157427
Verrucomicrobiota
GTC
Asp
>WENV182285408
OHVN01001778
293079
Verrucomicrobiota
CGC
Ala
>WENV182285654
OHVN01022762
292636
Verrucomicrobiota
>WENV182285483
OHVN01004350
489412
Verrucomicrobiota
TCC
Gly
>WENV182285383
OHVN01001259
298263
Verrucomicrobiota
TTC
Glu
>WENV182285389
OHVN01001316
293069
Verrucomicrobiota
CTT
Lys
>WENV182285437
OHVN01002752
406336
Verrucomicrobiota
CCT
Arg
>WENV182285539
OHVN01008014
406369
Verrucomicrobiota
CCG
Arg
>WENV182285430
OHVN01002510
405940
Verrucomicrobiota
GGT
Thr
>WENV182285622
OHVN01017215
406044
Verrucomicrobiota
CTG
Gln
>WENV182285375
OHVN01001105
187556
Verrucomicrobiota
GGG
Pro
>WENV182285463
OHVN01003345
406037
Verrucomicrobiota
GTG
His
>WENV182285564
OHVN01010770
406360
Verrucomicrobiota
GAC
Val
>WENV182285524
OHVN01007100
187548
Verrucomicrobiota
TCT
Arg
>WENV182285388
OHVN01001316
406040
Verrucomicrobiota
CGT
Thr
>WENV182285494
OHVN01004712
406039
Verrucomicrobiota
CAC
Val
>WENV182285501
OHVN01005173
406368
Verrucomicrobiota
TTG
Gln
>WENV182285489
OHVN01004566
101461
Verrucomicrobiota
GTA
Tyr
>WENV182285543
OHVN01008356
293095
Verrucomicrobiota
TTT
Lys
>WENV182285475
OHVN01004073
187561
Verrucomicrobiota
CGG
Pro
>WENV182285417
OHVN01002087
406342
Verrucomicrobiota
CAT
Met
>WENV182285514
OHVN01006106
406351
Verrucomicrobiota
GTT
Asn
>WENV182285479
OHVN01004153
303305
Verrucomicrobiota
GGC
Ala
>WENV182285446
OHVN01002957
406346
Verrucomicrobiota
TAC
Val
>WENV182285510
OHVN01005749
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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