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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182601292
OJJI01004149
148006
Verrucomicrobiota
CAA
Leu
>WENV182601369
OJJI01010796
293105
Verrucomicrobiota
CAT
Met
>WENV182601344
OJJI01008736
405901
Verrucomicrobiota
GCC
Gly
>WENV182601370
OJJI01011211
405901
Verrucomicrobiota
GCC
Gly
>WENV182601251
OJJI01001940
8960
Verrucomicrobiota
CGA
Ser
>WENV182601443
OJJI01025140
101463
Verrucomicrobiota
TAA
Leu
>WENV182601284
OJJI01003457
293079
Verrucomicrobiota
CGC
Ala
>WENV182601402
OJJI01016432
187548
Verrucomicrobiota
TCT
Arg
>WENV182601334
OJJI01007984
187561
Verrucomicrobiota
CGG
Pro
>WENV182601226
OJJI01001249
406351
Verrucomicrobiota
GTT
Asn
>WENV182601335
OJJI01008045
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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