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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182898462
OKSR01003740
246260
Verrucomicrobiota
>WENV182898677
OKSR01023188
119661
Verrucomicrobiota
CAA
Leu
>WENV182898606
OKSR01012647
344841
Verrucomicrobiota
CAC
Val
>WENV182898403
OKSR01002210
170105
Verrucomicrobiota
CAT
Met
>WENV182898562
OKSR01009968
345115
Verrucomicrobiota
CAT
Met
>WENV182898715
OKSR01027829
246709
Verrucomicrobiota
CAT
Met
>WENV182898592
OKSR01011500
414625
Verrucomicrobiota
CCC
Gly
>WENV182898654
OKSR01019233
345142
Verrucomicrobiota
CCG
Arg
>WENV182898618
OKSR01013427
7274
Verrucomicrobiota
CGA
Ser
>WENV182898546
OKSR01008804
155268
Verrucomicrobiota
CGG
Pro
>WENV182898623
OKSR01014115
246728
Verrucomicrobiota
GAA
Phe
>WENV182898676
OKSR01022793
7256
Verrucomicrobiota
GCT
Ser
>WENV182898404
OKSR01002353
17023
Verrucomicrobiota
GGA
Ser
>WENV182898484
OKSR01004538
82054
Verrucomicrobiota
GTA
Tyr
>WENV182898474
OKSR01004159
128202
Verrucomicrobiota
GTC
Asp
>WENV182898514
OKSR01006665
344839
Verrucomicrobiota
GTG
His
>WENV182898583
OKSR01010923
345124
Verrucomicrobiota
GTT
Asn
>WENV182898461
OKSR01003740
82056
Verrucomicrobiota
TAA
Leu
>WENV182898526
OKSR01007318
97755
Verrucomicrobiota
TAG
Leu
>WENV182898593
OKSR01011500
419909
Verrucomicrobiota
TCC
Gly
>WENV182898634
OKSR01016727
155256
Verrucomicrobiota
TCT
Arg
>WENV182898770
OKSR01042377
46246
Verrucomicrobiota
TGA
Ser
>WENV182898624
OKSR01014115
154693
Verrucomicrobiota
TGG
Pro
>WENV182898670
OKSR01022178
345123
Verrucomicrobiota
TGT
Thr
>WENV182898777
OKSR01045053
246700
Verrucomicrobiota
TTC
Glu
>WENV182898706
OKSR01026630
345141
Verrucomicrobiota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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