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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183169712
OLPA01008165
292636
Verrucomicrobiota
>WENV183169111
OLPA01001110
101600
Verrucomicrobiota
AAG
Leu
>WENV183168880
OLPA01000371
148006
Verrucomicrobiota
CAA
Leu
>WENV183168720
OLPA01000113
406039
Verrucomicrobiota
CAC
Val
>WENV183169060
OLPA01000894
75458
Verrucomicrobiota
CAG
Leu
>WENV183169157
OLPA01001377
293105
Verrucomicrobiota
CAT
Met
>WENV183169020
OLPA01000769
229220
Verrucomicrobiota
CAT
Met
>WENV183168750
OLPA01000166
406342
Verrucomicrobiota
CAT
Met
>WENV183169098
OLPA01001086
483642
Verrucomicrobiota
CCC
Gly
>WENV183169739
OLPA01008966
406369
Verrucomicrobiota
CCG
Arg
>WENV183169168
OLPA01001453
406336
Verrucomicrobiota
CCT
Arg
>WENV183168857
OLPA01000323
8960
Verrucomicrobiota
CGA
Ser
>WENV183169404
OLPA01003228
293079
Verrucomicrobiota
CGC
Ala
>WENV183168680
OLPA01000066
187561
Verrucomicrobiota
CGG
Pro
>WENV183168681
OLPA01000066
406040
Verrucomicrobiota
CGT
Thr
>WENV183169222
OLPA01001701
406044
Verrucomicrobiota
CTG
Gln
>WENV183168682
OLPA01000066
293069
Verrucomicrobiota
CTT
Lys
>WENV183168683
OLPA01000066
293069
Verrucomicrobiota
CTT
Lys
>WENV183169883
OLPA01015169
293125
Verrucomicrobiota
GAA
Phe
>WENV183168836
OLPA01000276
406360
Verrucomicrobiota
GAC
Val
>WENV183169024
OLPA01000787
406043
Verrucomicrobiota
GCA
Cys
>WENV183169205
OLPA01001632
405901
Verrucomicrobiota
GCC
Gly
>WENV183169240
OLPA01001816
405901
Verrucomicrobiota
GCC
Gly
>WENV183170053
OLPA01027891
8938
Verrucomicrobiota
GCT
Ser
>WENV183169550
OLPA01004810
21159
Verrucomicrobiota
GGA
Ser
>WENV183169002
OLPA01000715
303305
Verrucomicrobiota
GGC
Ala
>WENV183169185
OLPA01001556
187556
Verrucomicrobiota
GGG
Pro
>WENV183169159
OLPA01001393
405940
Verrucomicrobiota
GGT
Thr
>WENV183169194
OLPA01001598
101461
Verrucomicrobiota
GTA
Tyr
>WENV183168843
OLPA01000287
157427
Verrucomicrobiota
GTC
Asp
>WENV183169223
OLPA01001701
157427
Verrucomicrobiota
GTC
Asp
>WENV183169156
OLPA01001377
406037
Verrucomicrobiota
GTG
His
>WENV183169860
OLPA01013926
406351
Verrucomicrobiota
GTT
Asn
>WENV183169711
OLPA01008165
101463
Verrucomicrobiota
TAA
Leu
>WENV183168835
OLPA01000276
406346
Verrucomicrobiota
TAC
Val
>WENV183169447
OLPA01003483
120352
Verrucomicrobiota
TAG
Leu
>WENV183169097
OLPA01001086
489412
Verrucomicrobiota
TCC
Gly
>WENV183169072
OLPA01000952
187548
Verrucomicrobiota
TCT
Arg
>WENV183168751
OLPA01000166
57652
Verrucomicrobiota
TGA
Ser
>WENV183169884
OLPA01015169
186928
Verrucomicrobiota
TGG
Pro
>WENV183169128
OLPA01001226
406350
Verrucomicrobiota
TGT
Thr
>WENV183169155
OLPA01001377
298263
Verrucomicrobiota
TTC
Glu
>WENV183169003
OLPA01000715
406368
Verrucomicrobiota
TTG
Gln
>WENV183168965
OLPA01000583
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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