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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183261569
OLRQ01000003
246701
Verrucomicrobiota
TTT
Lys
>WENV183261570
OLRQ01000003
155256
Verrucomicrobiota
TCT
Arg
>WENV183261580
OLRQ01000005
345110
Verrucomicrobiota
CCT
Arg
>WENV183261581
OLRQ01000005
82056
Verrucomicrobiota
TAA
Leu
>WENV183261582
OLRQ01000005
246260
Verrucomicrobiota
>WENV183261583
OLRQ01000005
7256
Verrucomicrobiota
GCT
Ser
>WENV183261585
OLRQ01000005
119661
Verrucomicrobiota
CAA
Leu
>WENV183261586
OLRQ01000005
97755
Verrucomicrobiota
TAG
Leu
>WENV183261600
OLRQ01000010
345115
Verrucomicrobiota
CAT
Met
>WENV183261601
OLRQ01000010
46246
Verrucomicrobiota
TGA
Ser
>WENV183261602
OLRQ01000010
368497
Verrucomicrobiota
GCC
Gly
>WENV183261603
OLRQ01000010
246700
Verrucomicrobiota
TTC
Glu
>WENV183261604
OLRQ01000010
344839
Verrucomicrobiota
GTG
His
>WENV183261605
OLRQ01000010
246709
Verrucomicrobiota
CAT
Met
>WENV183261606
OLRQ01000010
82181
Verrucomicrobiota
AAG
Leu
>WENV183261607
OLRQ01000010
344844
Verrucomicrobiota
GCA
Cys
>WENV183261608
OLRQ01000010
246700
Verrucomicrobiota
TTC
Glu
>WENV183261609
OLRQ01000010
345123
Verrucomicrobiota
TGT
Thr
>WENV183261610
OLRQ01000010
246687
Verrucomicrobiota
CGC
Ala
>WENV183261627
OLRQ01000014
344841
Verrucomicrobiota
CAC
Val
>WENV183261628
OLRQ01000014
345141
Verrucomicrobiota
TTG
Gln
>WENV183261629
OLRQ01000014
344845
Verrucomicrobiota
CTG
Gln
>WENV183261687
OLRQ01000034
345124
Verrucomicrobiota
GTT
Asn
>WENV183261688
OLRQ01000034
82054
Verrucomicrobiota
GTA
Tyr
>WENV183261691
OLRQ01000037
345119
Verrucomicrobiota
TAC
Val
>WENV183261692
OLRQ01000037
345133
Verrucomicrobiota
GAC
Val
>WENV183261753
OLRQ01000067
344751
Verrucomicrobiota
GGT
Thr
>WENV183261754
OLRQ01000067
287733
Verrucomicrobiota
CCA
Trp
>WENV183261786
OLRQ01000116
128202
Verrucomicrobiota
GTC
Asp
>WENV183261787
OLRQ01000116
17023
Verrucomicrobiota
GGA
Ser
>WENV183261874
OLRQ01000177
155264
Verrucomicrobiota
GGG
Pro
>WENV183261885
OLRQ01000207
345142
Verrucomicrobiota
CCG
Arg
>WENV183261997
OLRQ01000363
414625
Verrucomicrobiota
CCC
Gly
>WENV183261998
OLRQ01000363
419909
Verrucomicrobiota
TCC
Gly
>WENV183261999
OLRQ01000363
246728
Verrucomicrobiota
GAA
Phe
>WENV183262000
OLRQ01000363
154693
Verrucomicrobiota
TGG
Pro
>WENV183262010
OLRQ01000399
344842
Verrucomicrobiota
CGT
Thr
>WENV183262011
OLRQ01000399
246677
Verrucomicrobiota
CTT
Lys
>WENV183262012
OLRQ01000399
246677
Verrucomicrobiota
CTT
Lys
>WENV183262019
OLRQ01000408
368497
Verrucomicrobiota
GCC
Gly
>WENV183262032
OLRQ01000437
170105
Verrucomicrobiota
CAT
Met
>WENV183262079
OLRQ01000539
128202
Verrucomicrobiota
GTC
Asp
>WENV183262246
OLRQ01001088
7274
Verrucomicrobiota
CGA
Ser
>WENV183262257
OLRQ01001134
60880
Verrucomicrobiota
CAG
Leu
>WENV183262352
OLRQ01001571
155268
Verrucomicrobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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