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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
214 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV026168
AACY020945351
278884
Bacteroidetes
GGC
Ala
>WENV058391
AACY023327475
228674
Bacteroidetes
CAA
Leu
>WENV051884
AACY022988383
72832
Bacteroidetes
TAA
Leu
>WENV058548
AACY023333369
273594
Bacteroidetes
CAT
Met
>WENV024386
AACY020802575
659822
Bacteroidetes
GCC
Gly
>WENV029467
AACY021201462
780607
Bacteroidetes
TTG
Gln
>WENV030195
AACY021263856
463653
Bacteroidetes
TCC
Gly
>WENV044111
AACY022389997
32554
Bacteroidetes
GGA
Ser
>WENV002042
AACY020057512
781675
Bacteroidetes
>WENV046869
AACY022627320
462245
Bacteroidetes
GCC
Gly
>WENV064427
AACY023542775
462245
Bacteroidetes
GCC
Gly
>WENV072635
AACY023891738
462245
Bacteroidetes
GCC
Gly
>WENV066652
AACY023656942
655581
Bacteroidetes
GGT
Thr
>WENV062130
AACY023448813
658281
Bacteroidetes
TTC
Glu
>WENV062131
AACY023448813
658281
Bacteroidetes
TTC
Glu
>WENV001957
AACY020055111
297979
Bacteroidetes
GTT
Asn
>WENV014937
AACY020417494
454409
Bacteroidetes
GCC
Gly
>WENV007998
AACY020212161
241614
Bacteroidetes
GAC
Val
>WENV008439
AACY020226470
241614
Bacteroidetes
GAC
Val
>WENV009030
AACY020243029
241614
Bacteroidetes
GAC
Val
>WENV009077
AACY020244069
241614
Bacteroidetes
GAC
Val
>WENV010078
AACY020272352
241614
Bacteroidetes
GAC
Val
>WENV017602
AACY020487657
241614
Bacteroidetes
GAC
Val
>WENV018838
AACY020519883
241614
Bacteroidetes
GAC
Val
>WENV022446
AACY020650702
241614
Bacteroidetes
GAC
Val
>WENV027560
AACY021053831
241614
Bacteroidetes
GAC
Val
>WENV031879
AACY021401293
241614
Bacteroidetes
GAC
Val
>WENV041065
AACY022130717
241614
Bacteroidetes
GAC
Val
>WENV043500
AACY022328228
241614
Bacteroidetes
GAC
Val
>WENV044600
AACY022436536
241614
Bacteroidetes
GAC
Val
>WENV045002
AACY022474031
241614
Bacteroidetes
GAC
Val
>WENV046349
AACY022589856
241614
Bacteroidetes
GAC
Val
>WENV055371
AACY023223475
241614
Bacteroidetes
GAC
Val
>WENV062704
AACY023472937
241614
Bacteroidetes
GAC
Val
>WENV062959
AACY023481862
241614
Bacteroidetes
GAC
Val
>WENV071580
AACY023852943
241614
Bacteroidetes
GAC
Val
>WENV072100
AACY023871159
241614
Bacteroidetes
GAC
Val
>WENV073361
AACY023924956
241614
Bacteroidetes
GAC
Val
>WENV002031
AACY020057074
279276
Bacteroidetes
GAT
Ile
>WENV016762
AACY020469417
279276
Bacteroidetes
GAT
Ile
>WENV047250
AACY022650542
279276
Bacteroidetes
GAT
Ile
>WENV057595
AACY023299754
279276
Bacteroidetes
GAT
Ile
>WENV058385
AACY023327315
461017
Bacteroidetes
TCC
Gly
>WENV058386
AACY023327315
461017
Bacteroidetes
TCC
Gly
>WENV002007
AACY020056363
181685
Bacteroidetes
TAG
Leu
>WENV051813
AACY022983222
277303
Bacteroidetes
TGT
Thr
>WENV001665
AACY020047271
457615
Bacteroidetes
TTT
Lys
>WENV038454
AACY021935255
457615
Bacteroidetes
TTT
Lys
>WENV000360
AACY020010789
272122
Bacteroidetes
GTC
Asp
>WENV000772
AACY020025024
272122
Bacteroidetes
GTC
Asp
>WENV002686
AACY020074191
272122
Bacteroidetes
GTC
Asp
>WENV003286
AACY020089872
272122
Bacteroidetes
GTC
Asp
>WENV003767
AACY020103997
272122
Bacteroidetes
GTC
Asp
>WENV008980
AACY020241834
272122
Bacteroidetes
GTC
Asp
>WENV009245
AACY020248399
272122
Bacteroidetes
GTC
Asp
>WENV009322
AACY020250749
272122
Bacteroidetes
GTC
Asp
>WENV009671
AACY020260017
272122
Bacteroidetes
GTC
Asp
>WENV009881
AACY020265995
272122
Bacteroidetes
GTC
Asp
>WENV010966
AACY020298002
272122
Bacteroidetes
GTC
Asp
>WENV014302
AACY020396180
272122
Bacteroidetes
GTC
Asp
>WENV018320
AACY020506015
272122
Bacteroidetes
GTC
Asp
>WENV018687
AACY020515720
272122
Bacteroidetes
GTC
Asp
>WENV021401
AACY020568921
272122
Bacteroidetes
GTC
Asp
>WENV022487
AACY020653485
272122
Bacteroidetes
GTC
Asp
>WENV026298
AACY020955537
272122
Bacteroidetes
GTC
Asp
>WENV027041
AACY021014278
272122
Bacteroidetes
GTC
Asp
>WENV028738
AACY021141773
272122
Bacteroidetes
GTC
Asp
>WENV033662
AACY021546155
272122
Bacteroidetes
GTC
Asp
>WENV034428
AACY021608832
272122
Bacteroidetes
GTC
Asp
>WENV034843
AACY021647721
272122
Bacteroidetes
GTC
Asp
>WENV037030
AACY021827105
272122
Bacteroidetes
GTC
Asp
>WENV041715
AACY022180902
272122
Bacteroidetes
GTC
Asp
>WENV044054
AACY022384869
272122
Bacteroidetes
GTC
Asp
>WENV044908
AACY022464439
272122
Bacteroidetes
GTC
Asp
>WENV050049
AACY022841796
272122
Bacteroidetes
GTC
Asp
>WENV051363
AACY022951106
272122
Bacteroidetes
GTC
Asp
>WENV055016
AACY023207631
272122
Bacteroidetes
GTC
Asp
>WENV062753
AACY023474629
272122
Bacteroidetes
GTC
Asp
>WENV062845
AACY023478074
272122
Bacteroidetes
GTC
Asp
>WENV062851
AACY023478319
272122
Bacteroidetes
GTC
Asp
>WENV062881
AACY023479534
272122
Bacteroidetes
GTC
Asp
>WENV064022
AACY023525928
272122
Bacteroidetes
GTC
Asp
>WENV064280
AACY023536029
272122
Bacteroidetes
GTC
Asp
>WENV065518
AACY023598521
272122
Bacteroidetes
GTC
Asp
>WENV066212
AACY023636292
272122
Bacteroidetes
GTC
Asp
>WENV072243
AACY023877069
272122
Bacteroidetes
GTC
Asp
>WENV072287
AACY023878915
272122
Bacteroidetes
GTC
Asp
>WENV073951
AACY023948609
272122
Bacteroidetes
GTC
Asp
>WENV075387
AACY024031116
272122
Bacteroidetes
GTC
Asp
>WENV076181
AACY024081436
272122
Bacteroidetes
GTC
Asp
>WENV006453
AACY020173978
781994
Bacteroidetes
CCA
Trp
>WENV006615
AACY020176854
781994
Bacteroidetes
CCA
Trp
>WENV076505
AACY024100182
781994
Bacteroidetes
CCA
Trp
>WENV058615
AACY023335675
218394
Bacteroidetes
GTA
Tyr
>WENV033592
AACY021542159
459901
Bacteroidetes
CCA
Trp
>WENV044763
AACY022451081
459901
Bacteroidetes
CCA
Trp
>WENV040621
AACY022096361
180131
Bacteroidetes
TAG
Leu
>WENV055953
AACY023244650
180131
Bacteroidetes
TAG
Leu
>WENV057975
AACY023313325
275494
Bacteroidetes
CAT
Met
>WENV028503
AACY021126078
275494
Bacteroidetes
CAT
Met
>WENV002137
AACY020059267
464053
Bacteroidetes
GAA
Phe
>WENV000275
AACY020008743
241654
Bacteroidetes
TAC
Val
>WENV001430
AACY020040757
241654
Bacteroidetes
TAC
Val
>WENV016652
AACY020467698
241654
Bacteroidetes
TAC
Val
>WENV032216
AACY021426945
241654
Bacteroidetes
TAC
Val
>WENV075296
AACY024025620
241654
Bacteroidetes
TAC
Val
>WENV016911
AACY020472053
460716
Bacteroidetes
GAA
Phe
>WENV051883
AACY022988383
460716
Bacteroidetes
GAA
Phe
>WENV058505
AACY023331373
460716
Bacteroidetes
GAA
Phe
>WENV000669
AACY020020847
454305
Bacteroidetes
TTT
Lys
>WENV000756
AACY020024502
454305
Bacteroidetes
TTT
Lys
>WENV001108
AACY020033925
454305
Bacteroidetes
TTT
Lys
>WENV002301
AACY020064485
454305
Bacteroidetes
TTT
Lys
>WENV009560
AACY020257126
454305
Bacteroidetes
TTT
Lys
>WENV010654
AACY020288454
454305
Bacteroidetes
TTT
Lys
>WENV046693
AACY022616479
454305
Bacteroidetes
TTT
Lys
>WENV001403
AACY020040272
657921
Bacteroidetes
TTC
Glu
>WENV007859
AACY020208656
280824
Bacteroidetes
TGC
Ala
>WENV009430
AACY020253744
280824
Bacteroidetes
TGC
Ala
>WENV015887
AACY020446895
280824
Bacteroidetes
TGC
Ala
>WENV016533
AACY020465148
280824
Bacteroidetes
TGC
Ala
>WENV018245
AACY020503880
280824
Bacteroidetes
TGC
Ala
>WENV018297
AACY020505270
280824
Bacteroidetes
TGC
Ala
>WENV020608
AACY020556376
280824
Bacteroidetes
TGC
Ala
>WENV029168
AACY021177211
280824
Bacteroidetes
TGC
Ala
>WENV038517
AACY021939800
280824
Bacteroidetes
TGC
Ala
>WENV050216
AACY022853672
280824
Bacteroidetes
TGC
Ala
>WENV055972
AACY023245072
280824
Bacteroidetes
TGC
Ala
>WENV056791
AACY023265329
280824
Bacteroidetes
TGC
Ala
>WENV060950
AACY023417064
280824
Bacteroidetes
TGC
Ala
>WENV062366
AACY023458951
280824
Bacteroidetes
TGC
Ala
>WENV063616
AACY023511190
280824
Bacteroidetes
TGC
Ala
>WENV064544
AACY023547716
280824
Bacteroidetes
TGC
Ala
>WENV065404
AACY023592551
280824
Bacteroidetes
TGC
Ala
>WENV065683
AACY023607495
280824
Bacteroidetes
TGC
Ala
>WENV072084
AACY023870305
280824
Bacteroidetes
TGC
Ala
>WENV073911
AACY023945159
280824
Bacteroidetes
TGC
Ala
>WENV075206
AACY024018499
280824
Bacteroidetes
TGC
Ala
>WENV003896
AACY020108153
241634
Bacteroidetes
TGG
Pro
>WENV008698
AACY020233735
241634
Bacteroidetes
TGG
Pro
>WENV028088
AACY021094220
241634
Bacteroidetes
TGG
Pro
>WENV035032
AACY021665520
241634
Bacteroidetes
TGG
Pro
>WENV042262
AACY022223986
241634
Bacteroidetes
TGG
Pro
>WENV051075
AACY022928993
241634
Bacteroidetes
TGG
Pro
>WENV065198
AACY023580203
241634
Bacteroidetes
TGG
Pro
>WENV068576
AACY023732006
241634
Bacteroidetes
TGG
Pro
>WENV075685
AACY024049146
241634
Bacteroidetes
TGG
Pro
>WENV074343
AACY023970415
181258
Bacteroidetes
GTA
Tyr
>WENV054814
AACY023199492
296838
Bacteroidetes
GAT
Ile
>WENV000188
AACY020006115
278610
Bacteroidetes
GTC
Asp
>WENV009973
AACY020268294
278610
Bacteroidetes
GTC
Asp
>WENV000515
AACY020015026
278725
Bacteroidetes
GTT
Asn
>WENV000679
AACY020021430
278725
Bacteroidetes
GTT
Asn
>WENV000852
AACY020027131
278725
Bacteroidetes
GTT
Asn
>WENV003364
AACY020091416
278725
Bacteroidetes
GTT
Asn
>WENV005634
AACY020157168
278725
Bacteroidetes
GTT
Asn
>WENV009676
AACY020260116
278725
Bacteroidetes
GTT
Asn
>WENV011952
AACY020326181
278725
Bacteroidetes
GTT
Asn
>WENV012213
AACY020333550
278725
Bacteroidetes
GTT
Asn
>WENV013425
AACY020369867
278725
Bacteroidetes
GTT
Asn
>WENV013975
AACY020386130
278725
Bacteroidetes
GTT
Asn
>WENV014058
AACY020389034
278725
Bacteroidetes
GTT
Asn
>WENV014471
AACY020401685
278725
Bacteroidetes
GTT
Asn
>WENV014995
AACY020419640
278725
Bacteroidetes
GTT
Asn
>WENV017778
AACY020492044
278725
Bacteroidetes
GTT
Asn
>WENV017905
AACY020495418
278725
Bacteroidetes
GTT
Asn
>WENV018413
AACY020508639
278725
Bacteroidetes
GTT
Asn
>WENV018434
AACY020509192
278725
Bacteroidetes
GTT
Asn
>WENV020039
AACY020545377
278725
Bacteroidetes
GTT
Asn
>WENV020199
AACY020549580
278725
Bacteroidetes
GTT
Asn
>WENV028659
AACY021137033
278725
Bacteroidetes
GTT
Asn
>WENV031880
AACY021401399
278725
Bacteroidetes
GTT
Asn
>WENV033203
AACY021508818
278725
Bacteroidetes
GTT
Asn
>WENV040161
AACY022064555
278725
Bacteroidetes
GTT
Asn
>WENV041562
AACY022168763
278725
Bacteroidetes
GTT
Asn
>WENV046172
AACY022578174
278725
Bacteroidetes
GTT
Asn
>WENV050061
AACY022842866
278725
Bacteroidetes
GTT
Asn
>WENV052374
AACY023023900
278725
Bacteroidetes
GTT
Asn
>WENV052397
AACY023025416
278725
Bacteroidetes
GTT
Asn
>WENV062354
AACY023458562
278725
Bacteroidetes
GTT
Asn
>WENV063360
AACY023501312
278725
Bacteroidetes
GTT
Asn
>WENV064860
AACY023562339
278725
Bacteroidetes
GTT
Asn
>WENV065554
AACY023600261
278725
Bacteroidetes
GTT
Asn
>WENV065879
AACY023618940
278725
Bacteroidetes
GTT
Asn
>WENV067163
AACY023677890
278725
Bacteroidetes
GTT
Asn
>WENV067261
AACY023682129
278725
Bacteroidetes
GTT
Asn
>WENV068760
AACY023738181
278725
Bacteroidetes
GTT
Asn
>WENV072820
AACY023898614
278725
Bacteroidetes
GTT
Asn
>WENV072978
AACY023905216
278725
Bacteroidetes
GTT
Asn
>WENV074062
AACY023954905
278725
Bacteroidetes
GTT
Asn
>WENV076621
AACY024104012
278725
Bacteroidetes
GTT
Asn
>WENV042602
AACY022250947
180642
Bacteroidetes
TAG
Leu
>WENV043513
AACY022329488
780691
Bacteroidetes
CCA
Trp
>WENV054571
AACY023174664
183028
Bacteroidetes
TAG
Leu
>WENV054580
AACY023177608
183028
Bacteroidetes
TAG
Leu
>WENV000675
AACY020021192
271305
Bacteroidetes
CAT
Met
>WENV016696
AACY020468431
275630
Bacteroidetes
GGC
Ala
>WENV057799
AACY023306978
275630
Bacteroidetes
GGC
Ala
>WENV024387
AACY020802575
114385
Bacteroidetes
TAA
Leu
>WENV000366
AACY020010972
271642
Bacteroidetes
TCT
Arg
>WENV002741
AACY020075440
271642
Bacteroidetes
TCT
Arg
>WENV004997
AACY020139836
271642
Bacteroidetes
TCT
Arg
>WENV009214
AACY020247613
271642
Bacteroidetes
TCT
Arg
>WENV012076
AACY020329794
271642
Bacteroidetes
TCT
Arg
>WENV017108
AACY020477131
271642
Bacteroidetes
TCT
Arg
>WENV018431
AACY020509141
271642
Bacteroidetes
TCT
Arg
>WENV027681
AACY021063287
271642
Bacteroidetes
TCT
Arg
>WENV030019
AACY021248604
271642
Bacteroidetes
TCT
Arg
>WENV032857
AACY021480110
271642
Bacteroidetes
TCT
Arg
>WENV041112
AACY022135121
271642
Bacteroidetes
TCT
Arg
>WENV046489
AACY022601419
271642
Bacteroidetes
TCT
Arg
>WENV049881
AACY022830269
271642
Bacteroidetes
TCT
Arg
>WENV050266
AACY022857071
655878
Bacteroidetes
CCT
Arg
>WENV056600
AACY023260683
460717
Bacteroidetes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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