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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078349
AAGA01000508
241030
Alphaproteobacteria
TCT
Arg
>WENV078416
AAGA01009864
452917
Alphaproteobacteria
TAC
Val
>WENV078383
AAGA01004197
452884
Alphaproteobacteria
CCA
Trp
>WENV078386
AAGA01004587
780661
Alphaproteobacteria
GCA
Cys
>WENV078350
AAGA01000939
655359
Alphaproteobacteria
GAC
Val
>WENV078503
AAGA01024520
272172
Alphaproteobacteria
GAT
Ile
>WENV078475
AAGA01021098
46222
Alphaproteobacteria
GGA
Ser
>WENV078505
AAGA01024539
271956
Alphaproteobacteria
CAT
Met
>WENV078483
AAGA01022287
271956
Alphaproteobacteria
CAT
Met
>WENV078356
AAGA01001457
271956
Alphaproteobacteria
CAT
Met
>WENV078507
AAGA01024669
281027
Alphaproteobacteria
CCT
Arg
>WENV078506
AAGA01024593
658005
Alphaproteobacteria
GCC
Gly
>WENV078407
AAGA01008396
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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