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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV079566
AATF01000245
466831
Bacteroidota
GCC
Gly
>WENV079567
AATF01000245
466831
Bacteroidota
GCC
Gly
>WENV079584
AATF01000589
270471
Bacteroidota
GGC
Ala
>WENV079605
AATF01001868
452487
Bacteroidota
CCA
Trp
>WENV079610
AATF01002066
451478
Bacteroidota
TTT
Lys
>WENV079613
AATF01002237
451478
Bacteroidota
TTT
Lys
>WENV079611
AATF01002237
281318
Bacteroidota
GTT
Asn
>WENV079612
AATF01002237
281318
Bacteroidota
GTT
Asn
>WENV079639
AATF01003295
270471
Bacteroidota
GGC
Ala
>WENV079661
AATF01006077
467914
Bacteroidota
GCC
Gly
>WENV079660
AATF01006077
467914
Bacteroidota
GCC
Gly
>WENV079672
AATF01008199
451478
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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