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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015292
AZIG01000596
275828
Alphaproteobacteria
GTC
Asp
>WENV170015311
AZIG01002291
273797
Alphaproteobacteria
GGG
Pro
>WENV170015300
AZIG01001292
780326
Alphaproteobacteria
CCC
Gly
>WENV170015443
AZIG01007057
452884
Alphaproteobacteria
CCA
Trp
>WENV170015295
AZIG01001053
46070
Alphaproteobacteria
CGA
Ser
>WENV170015314
AZIG01002412
653534
Alphaproteobacteria
GCC
Gly
>WENV170015341
AZIG01003356
291540
Alphaproteobacteria
TGG
Pro
>WENV170015404
AZIG01006058
218119
Alphaproteobacteria
>WENV170015360
AZIG01004251
218119
Alphaproteobacteria
>WENV170015290
AZIG01000485
653538
Alphaproteobacteria
TTC
Glu
>WENV170015428
AZIG01006534
653538
Alphaproteobacteria
TTC
Glu
>WENV170015296
AZIG01001124
780661
Alphaproteobacteria
GCA
Cys
>WENV170015419
AZIG01006376
655359
Alphaproteobacteria
GAC
Val
>WENV170015313
AZIG01002411
154065
Alphaproteobacteria
GAG
Leu
>WENV170015321
AZIG01002635
454054
Alphaproteobacteria
TGC
Ala
>WENV170015323
AZIG01002645
454054
Alphaproteobacteria
TGC
Ala
>WENV170015276
AZIG01000158
451742
Alphaproteobacteria
GGC
Ala
>WENV170015278
AZIG01000317
274131
Alphaproteobacteria
CAT
Met
>WENV170015277
AZIG01000213
655358
Alphaproteobacteria
TTG
Gln
>WENV170015372
AZIG01004516
273803
Alphaproteobacteria
CCT
Arg
>WENV170015303
AZIG01001584
46222
Alphaproteobacteria
GGA
Ser
>WENV170015291
AZIG01000596
270796
Alphaproteobacteria
GTC
Asp
>WENV170015376
AZIG01004594
154064
Alphaproteobacteria
CAG
Leu
>WENV170015329
AZIG01002834
274133
Alphaproteobacteria
ACG
Arg
>WENV170015386
AZIG01005097
454914
Alphaproteobacteria
TTT
Lys
>WENV170015393
AZIG01005621
654103
Alphaproteobacteria
GAA
Phe
>WENV170015429
AZIG01006650
274130
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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