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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081743
BAAU01000009
451344
Bacillota
TGC
Ala
>WENV081744
BAAU01000009
270399
Bacillota
GAT
Ile
>WENV081745
BAAU01000010
653369
Bacillota
CTC
Glu
>WENV081746
BAAU01000010
451357
Bacillota
CTT
Lys
>WENV081760
BAAU01000177
270405
Bacillota
ACG
Arg
>WENV081773
BAAU01000404
112239
Bacillota
CAG
Leu
>WENV081779
BAAU01000429
451352
Bacillota
GGT
Thr
>WENV081780
BAAU01000429
284668
Bacillota
GTC
Asp
>WENV081783
BAAU01000454
284667
Bacillota
CAT
Met
>WENV081784
BAAU01000454
455828
Bacillota
TAC
Val
>WENV081787
BAAU01000454
270488
Bacillota
GTC
Asp
>WENV081807
BAAU01000640
461022
Bacillota
TGC
Ala
>WENV081808
BAAU01000670
466773
Bacillota
GGC
Ala
>WENV081809
BAAU01000673
270416
Bacillota
CAC
Val
>WENV081811
BAAU01000738
653369
Bacillota
CTC
Glu
>WENV081814
BAAU01000807
653369
Bacillota
CTC
Glu
>WENV081815
BAAU01000807
451357
Bacillota
CTT
Lys
>WENV081831
BAAU01001138
8223
Bacillota
GCT
Ser
>WENV081849
BAAU01001722
451357
Bacillota
CTT
Lys
>WENV081852
BAAU01001937
451355
Bacillota
GAC
Val
>WENV081879
BAAU01002929
282437
Bacillota
GTC
Asp
>WENV081898
BAAU01003369
112239
Bacillota
CAG
Leu
>WENV081899
BAAU01003490
281523
Bacillota
CCT
Arg
>WENV081905
BAAU01003608
275710
Bacillota
CCG
Arg
>WENV081909
BAAU01003925
779387
Bacillota
TTG
Gln
>WENV081918
BAAU01004300
451376
Bacillota
GCC
Gly
>WENV081919
BAAU01004300
451336
Bacillota
GAA
Phe
>WENV081920
BAAU01004300
284668
Bacillota
GTC
Asp
>WENV081926
BAAU01004648
451398
Bacillota
TGC
Ala
>WENV081929
BAAU01004710
451398
Bacillota
TGC
Ala
>WENV081944
BAAU01005851
451398
Bacillota
TGC
Ala
>WENV081946
BAAU01005923
275710
Bacillota
CCG
Arg
>WENV081951
BAAU01006353
270507
Bacillota
GTC
Asp
>WENV081952
BAAU01006353
457194
Bacillota
TAC
Val
>WENV081968
BAAU01006939
466782
Bacillota
CCC
Gly
>WENV081972
BAAU01007302
270438
Bacillota
TCT
Arg
>WENV081986
BAAU01008593
451357
Bacillota
CTT
Lys
>WENV082012
BAAU01010143
270405
Bacillota
ACG
Arg
>WENV082017
BAAU01010484
20504
Bacillota
GGA
Ser
>WENV082034
BAAU01011324
451352
Bacillota
GGT
Thr
>WENV082035
BAAU01011325
270405
Bacillota
ACG
Arg
>WENV082043
BAAU01012273
270447
Bacillota
GTT
Asn
>WENV082064
BAAU01015054
275710
Bacillota
CCG
Arg
>WENV082096
BAAU01020694
451384
Bacillota
TGG
Pro
>WENV082099
BAAU01020916
153689
Bacillota
GTA
Tyr
>WENV082103
BAAU01021158
282437
Bacillota
GTC
Asp
>WENV082107
BAAU01021330
780781
Bacillota
TCC
Gly
>WENV082114
BAAU01021729
451367
Bacillota
TAC
Val
>WENV082116
BAAU01021729
465093
Bacillota
GCC
Gly
>WENV082122
BAAU01022408
451336
Bacillota
GAA
Phe
>WENV082124
BAAU01022408
451377
Bacillota
TAC
Val
>WENV082125
BAAU01022408
451376
Bacillota
GCC
Gly
>WENV082130
BAAU01022587
457194
Bacillota
TAC
Val
>WENV082133
BAAU01022948
465106
Bacillota
TGT
Thr
>WENV082160
BAAU01026765
270416
Bacillota
CAC
Val
>WENV082170
BAAU01027962
653367
Bacillota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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