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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083625
BAAY01001062
86857
Bacteroidota
TAA
Leu
>WENV083624
BAAY01000990
270542
Bacteroidota
CAT
Met
>WENV083670
BAAY01002312
270412
Bacteroidota
GTT
Asn
>WENV083671
BAAY01002312
270412
Bacteroidota
GTT
Asn
>WENV083638
BAAY01001293
451354
Bacteroidota
TTT
Lys
>WENV083700
BAAY01003966
451354
Bacteroidota
TTT
Lys
>WENV083954
BAAY01021058
451354
Bacteroidota
TTT
Lys
>WENV083887
BAAY01013602
779388
Bacteroidota
CTG
Gln
>WENV083888
BAAY01013602
779388
Bacteroidota
CTG
Gln
>WENV083619
BAAY01000897
779381
Bacteroidota
CTG
Gln
>WENV083695
BAAY01003603
30278
Bacteroidota
GGA
Ser
>WENV083776
BAAY01006529
112241
Bacteroidota
CAA
Leu
>WENV083687
BAAY01003375
451360
Bacteroidota
CGT
Thr
>WENV083592
BAAY01000507
153684
Bacteroidota
GTA
Tyr
>WENV083970
BAAY01022933
153684
Bacteroidota
GTA
Tyr
>WENV083683
BAAY01002875
86859
Bacteroidota
TGA
Ser
>WENV083918
BAAY01016924
451389
Bacteroidota
GCC
Gly
>WENV083916
BAAY01016924
451389
Bacteroidota
GCC
Gly
>WENV083913
BAAY01016923
451389
Bacteroidota
GCC
Gly
>WENV083786
BAAY01007319
451389
Bacteroidota
GCC
Gly
>WENV083597
BAAY01000542
179905
Bacteroidota
TAG
Leu
>WENV083699
BAAY01003879
270418
Bacteroidota
GGC
Ala
>WENV083982
BAAY01025283
451431
Bacteroidota
CCA
Trp
>WENV083710
BAAY01004233
240600
Bacteroidota
GGG
Pro
>WENV083964
BAAY01021847
779393
Bacteroidota
TTG
Gln
>WENV083972
BAAY01023205
270471
Bacteroidota
GGC
Ala
>WENV083600
BAAY01000593
451484
Bacteroidota
CAT
Met
>WENV083568
BAAY01000151
451484
Bacteroidota
CAT
Met
>WENV083599
BAAY01000549
653343
Bacteroidota
CCT
Arg
>WENV083674
BAAY01002446
30277
Bacteroidota
GGA
Ser
>WENV083990
BAAY01026062
653377
Bacteroidota
CTC
Glu
>WENV083669
BAAY01002273
653350
Bacteroidota
GCA
Cys
>WENV083688
BAAY01003460
653350
Bacteroidota
GCA
Cys
>WENV083854
BAAY01011847
653350
Bacteroidota
GCA
Cys
>WENV083596
BAAY01000538
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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