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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084237
BAAZ01006101
467910
Firmicutes
TGC
Ala
>WENV084177
BAAZ01002868
451587
Firmicutes
TGC
Ala
>WENV084238
BAAZ01006101
279224
Firmicutes
GAT
Ile
>WENV084436
BAAZ01029758
279224
Firmicutes
GAT
Ile
>WENV084259
BAAZ01008148
451352
Firmicutes
GGT
Thr
>WENV084228
BAAZ01004923
451398
Firmicutes
TGC
Ala
>WENV084416
BAAZ01024938
465093
Firmicutes
GCC
Gly
>WENV084266
BAAZ01008632
72902
Firmicutes
TAA
Leu
>WENV084330
BAAZ01015412
653398
Firmicutes
CTC
Glu
>WENV084249
BAAZ01007285
451357
Firmicutes
CTT
Lys
>WENV084341
BAAZ01017246
452813
Firmicutes
GAA
Phe
>WENV084252
BAAZ01007869
451384
Firmicutes
TGG
Pro
>WENV084250
BAAZ01007285
653369
Firmicutes
CTC
Glu
>WENV084450
BAAZ01030884
285826
Firmicutes
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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