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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084967
BABB01000140
179905
Bacteroidetes
TAG
Leu
>WENV084972
BABB01000172
218000
Bacteroidetes
CAG
Leu
>WENV084975
BABB01000172
218000
Bacteroidetes
CAG
Leu
>WENV084977
BABB01000200
653342
Bacteroidetes
CCG
Arg
>WENV084980
BABB01000253
30277
Bacteroidetes
GGA
Ser
>WENV084981
BABB01000274
30278
Bacteroidetes
GGA
Ser
>WENV084991
BABB01000304
86859
Bacteroidetes
TGA
Ser
>WENV084992
BABB01000305
270542
Bacteroidetes
CAT
Met
>WENV085001
BABB01000332
153684
Bacteroidetes
GTA
Tyr
>WENV085019
BABB01000526
779393
Bacteroidetes
TTG
Gln
>WENV085023
BABB01000591
153684
Bacteroidetes
GTA
Tyr
>WENV085032
BABB01000638
653350
Bacteroidetes
GCA
Cys
>WENV085036
BABB01000824
451360
Bacteroidetes
CGT
Thr
>WENV085039
BABB01000919
451484
Bacteroidetes
CAT
Met
>WENV085042
BABB01001059
30277
Bacteroidetes
GGA
Ser
>WENV085052
BABB01001325
270491
Bacteroidetes
GGC
Ala
>WENV085053
BABB01001337
270492
Bacteroidetes
GTG
His
>WENV085078
BABB01002333
451454
Bacteroidetes
CCC
Gly
>WENV085087
BABB01002501
270530
Bacteroidetes
CAT
Met
>WENV085104
BABB01003488
653388
Bacteroidetes
TTC
Glu
>WENV085114
BABB01004406
270497
Bacteroidetes
GTG
His
>WENV085120
BABB01005041
653389
Bacteroidetes
GGT
Thr
>WENV085175
BABB01010597
653377
Bacteroidetes
CTC
Glu
>WENV085177
BABB01010788
112241
Bacteroidetes
CAA
Leu
>WENV085184
BABB01011362
153684
Bacteroidetes
GTA
Tyr
>WENV085196
BABB01013159
451478
Bacteroidetes
TTT
Lys
>WENV085199
BABB01013528
72680
Bacteroidetes
TAA
Leu
>WENV085211
BABB01015457
653350
Bacteroidetes
GCA
Cys
>WENV085217
BABB01016502
153692
Bacteroidetes
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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