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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085034
BABB01000648
86857
Bacteroidota
TAA
Leu
>WENV084992
BABB01000305
270542
Bacteroidota
CAT
Met
>WENV085007
BABB01000389
451354
Bacteroidota
TTT
Lys
>WENV085088
BABB01002580
451354
Bacteroidota
TTT
Lys
>WENV085196
BABB01013159
451478
Bacteroidota
TTT
Lys
>WENV085120
BABB01005041
653389
Bacteroidota
GGT
Thr
>WENV084981
BABB01000274
30278
Bacteroidota
GGA
Ser
>WENV085177
BABB01010788
112241
Bacteroidota
CAA
Leu
>WENV084975
BABB01000172
218000
Bacteroidota
CAG
Leu
>WENV084972
BABB01000172
218000
Bacteroidota
CAG
Leu
>WENV085053
BABB01001337
270492
Bacteroidota
GTG
His
>WENV085036
BABB01000824
451360
Bacteroidota
CGT
Thr
>WENV085001
BABB01000332
153684
Bacteroidota
GTA
Tyr
>WENV085023
BABB01000591
153684
Bacteroidota
GTA
Tyr
>WENV085184
BABB01011362
153684
Bacteroidota
GTA
Tyr
>WENV084991
BABB01000304
86859
Bacteroidota
TGA
Ser
>WENV085222
BABB01017162
270514
Bacteroidota
GTT
Asn
>WENV085224
BABB01017162
270514
Bacteroidota
GTT
Asn
>WENV084967
BABB01000140
179905
Bacteroidota
TAG
Leu
>WENV085199
BABB01013528
72680
Bacteroidota
TAA
Leu
>WENV085011
BABB01000482
240600
Bacteroidota
GGG
Pro
>WENV085078
BABB01002333
451454
Bacteroidota
CCC
Gly
>WENV085019
BABB01000526
779393
Bacteroidota
TTG
Gln
>WENV085063
BABB01001680
270494
Bacteroidota
CGG
Pro
>WENV085052
BABB01001325
270491
Bacteroidota
GGC
Ala
>WENV085039
BABB01000919
451484
Bacteroidota
CAT
Met
>WENV085050
BABB01001279
653343
Bacteroidota
CCT
Arg
>WENV085104
BABB01003488
653388
Bacteroidota
TTC
Glu
>WENV085087
BABB01002501
270530
Bacteroidota
CAT
Met
>WENV085217
BABB01016502
153692
Bacteroidota
GTA
Tyr
>WENV084980
BABB01000253
30277
Bacteroidota
GGA
Ser
>WENV085042
BABB01001059
30277
Bacteroidota
GGA
Ser
>WENV085175
BABB01010597
653377
Bacteroidota
CTC
Glu
>WENV085032
BABB01000638
653350
Bacteroidota
GCA
Cys
>WENV085211
BABB01015457
653350
Bacteroidota
GCA
Cys
>WENV085064
BABB01001680
451452
Bacteroidota
CCA
Trp
>WENV085114
BABB01004406
270497
Bacteroidota
GTG
His
>WENV084977
BABB01000200
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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