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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086276
BABF01000024
274593
Bacillota
GAT
Ile
>WENV086275
BABF01000024
461022
Bacillota
TGC
Ala
>WENV086289
BABF01000161
451375
Bacillota
GGC
Ala
>WENV086292
BABF01000237
779402
Bacillota
TCC
Gly
>WENV086307
BABF01000294
31227
Bacillota
GCT
Ser
>WENV086306
BABF01000294
73370
Bacillota
TGA
Ser
>WENV086310
BABF01000321
451472
Bacillota
GTC
Asp
>WENV086318
BABF01000428
464163
Bacillota
CTT
Lys
>WENV086323
BABF01000435
464161
Bacillota
TAC
Val
>WENV086329
BABF01000518
464161
Bacillota
TAC
Val
>WENV086336
BABF01000582
451398
Bacillota
TGC
Ala
>WENV086357
BABF01000961
218534
Bacillota
CAA
Leu
>WENV086361
BABF01001014
660193
Bacillota
GCA
Cys
>WENV086370
BABF01001177
451398
Bacillota
TGC
Ala
>WENV086371
BABF01001229
455831
Bacillota
GTT
Asn
>WENV086372
BABF01001229
653354
Bacillota
TTC
Glu
>WENV086375
BABF01001271
464159
Bacillota
GGT
Thr
>WENV086377
BABF01001271
182209
Bacillota
GTA
Tyr
>WENV086374
BABF01001271
282408
Bacillota
CAT
Met
>WENV086404
BABF01002254
653354
Bacillota
TTC
Glu
>WENV086427
BABF01003197
451398
Bacillota
TGC
Ala
>WENV086432
BABF01003385
456820
Bacillota
CCA
Trp
>WENV086447
BABF01004305
274593
Bacillota
GAT
Ile
>WENV086448
BABF01004305
461022
Bacillota
TGC
Ala
>WENV086454
BABF01004820
452439
Bacillota
CTT
Lys
>WENV086479
BABF01007795
451398
Bacillota
TGC
Ala
>WENV086500
BABF01012285
653489
Bacillota
GTT
Asn
>WENV086503
BABF01012285
270726
Bacillota
GTC
Asp
>WENV086504
BABF01012285
653488
Bacillota
TGT
Thr
>WENV086502
BABF01012285
451672
Bacillota
TAC
Val
>WENV086505
BABF01012285
179950
Bacillota
GTA
Tyr
>WENV086508
BABF01012286
270722
Bacillota
TGG
Pro
>WENV086515
BABF01012286
179950
Bacillota
GTA
Tyr
>WENV086513
BABF01012286
270621
Bacillota
TCT
Arg
>WENV086509
BABF01012286
30295
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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