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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086593
BABG01000160
451484
Bacteroidota
CAT
Met
>WENV086596
BABG01000190
451360
Bacteroidota
CGT
Thr
>WENV086622
BABG01000605
218000
Bacteroidota
CAG
Leu
>WENV086627
BABG01000658
153684
Bacteroidota
GTA
Tyr
>WENV086632
BABG01000792
86859
Bacteroidota
TGA
Ser
>WENV086634
BABG01000916
782347
Bacteroidota
CTG
Gln
>WENV086650
BABG01001570
240600
Bacteroidota
GGG
Pro
>WENV086661
BABG01002333
179905
Bacteroidota
TAG
Leu
>WENV086664
BABG01002424
153684
Bacteroidota
GTA
Tyr
>WENV086666
BABG01002497
653565
Bacteroidota
CCT
Arg
>WENV086678
BABG01002817
779393
Bacteroidota
TTG
Gln
>WENV086680
BABG01002886
653342
Bacteroidota
CCG
Arg
>WENV086685
BABG01003349
87355
Bacteroidota
TGA
Ser
>WENV086688
BABG01003359
113008
Bacteroidota
GAG
Leu
>WENV086707
BABG01004166
30278
Bacteroidota
GGA
Ser
>WENV086715
BABG01004517
240600
Bacteroidota
GGG
Pro
>WENV086725
BABG01005292
270850
Bacteroidota
GGC
Ala
>WENV086731
BABG01005893
270851
Bacteroidota
TCT
Arg
>WENV086756
BABG01007030
270530
Bacteroidota
CAT
Met
>WENV086762
BABG01007118
270514
Bacteroidota
GTT
Asn
>WENV086765
BABG01007131
218000
Bacteroidota
CAG
Leu
>WENV086768
BABG01007131
218000
Bacteroidota
CAG
Leu
>WENV086779
BABG01008594
779393
Bacteroidota
TTG
Gln
>WENV086849
BABG01013537
653377
Bacteroidota
CTC
Glu
>WENV086900
BABG01021283
86857
Bacteroidota
TAA
Leu
>WENV086923
BABG01024560
653377
Bacteroidota
CTC
Glu
>WENV086930
BABG01026298
779381
Bacteroidota
CTG
Gln
>WENV086931
BABG01026580
86857
Bacteroidota
TAA
Leu
>WENV086936
BABG01027936
86859
Bacteroidota
TGA
Ser
>WENV086949
BABG01029881
87355
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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