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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170025979
CDTW01007585
653346
Bacillota
TTC
Glu
>WENV170026105
CDTW01016923
465106
Bacillota
TGT
Thr
>WENV170026366
CDTW01036732
465106
Bacillota
TGT
Thr
>WENV170026389
CDTW01037856
291157
Bacillota
GAT
Ile
>WENV170026537
CDTW01048334
270426
Bacillota
GAT
Ile
>WENV170026567
CDTW01051243
270426
Bacillota
GAT
Ile
>WENV170026450
CDTW01041773
451367
Bacillota
TAC
Val
>WENV170025910
CDTW01002191
468336
Bacillota
GCC
Gly
>WENV170025919
CDTW01002925
468336
Bacillota
GCC
Gly
>WENV170026127
CDTW01018622
270438
Bacillota
TCT
Arg
>WENV170026251
CDTW01028759
275959
Bacillota
CAT
Met
>WENV170026275
CDTW01031062
88702
Bacillota
CAG
Leu
>WENV170026274
CDTW01031062
88702
Bacillota
CAG
Leu
>WENV170026183
CDTW01023643
779389
Bacillota
TCC
Gly
>WENV170025986
CDTW01008264
274593
Bacillota
GAT
Ile
>WENV170026459
CDTW01042141
282769
Bacillota
CAT
Met
>WENV170026312
CDTW01032786
274813
Bacillota
ACG
Arg
>WENV170025978
CDTW01007585
270546
Bacillota
CAT
Met
>WENV170026540
CDTW01048606
467075
Bacillota
TGC
Ala
>WENV170025869
CDTW01000373
451375
Bacillota
GGC
Ala
>WENV170026493
CDTW01045951
30533
Bacillota
GCT
Ser
>WENV170025882
CDTW01000875
461574
Bacillota
TGT
Thr
>WENV170026458
CDTW01042141
457194
Bacillota
TAC
Val
>WENV170026303
CDTW01032786
457194
Bacillota
TAC
Val
>WENV170026248
CDTW01028759
457194
Bacillota
TAC
Val
>WENV170025940
CDTW01004530
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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