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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
142 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026625
CDTY01000890
451336
Bacillota
GAA
Phe
>WENV170026689
CDTY01003608
451336
Bacillota
GAA
Phe
>WENV170027184
CDTY01021381
451336
Bacillota
GAA
Phe
>WENV170027709
CDTY01042284
451336
Bacillota
GAA
Phe
>WENV170027832
CDTY01047063
451336
Bacillota
GAA
Phe
>WENV170027187
CDTY01021576
466895
Bacillota
TGC
Ala
>WENV170027131
CDTY01019424
451468
Bacillota
TAC
Val
>WENV170026604
CDTY01000048
275710
Bacillota
CCG
Arg
>WENV170028026
CDTY01054318
275710
Bacillota
CCG
Arg
>WENV170027241
CDTY01023774
270416
Bacillota
CAC
Val
>WENV170027620
CDTY01039420
270416
Bacillota
CAC
Val
>WENV170027887
CDTY01049216
270416
Bacillota
CAC
Val
>WENV170026954
CDTY01012962
653346
Bacillota
TTC
Glu
>WENV170026601
CDTY01000048
653346
Bacillota
TTC
Glu
>WENV170027275
CDTY01025000
270436
Bacillota
GTG
His
>WENV170027921
CDTY01050221
86860
Bacillota
TGA
Ser
>WENV170027871
CDTY01048772
86860
Bacillota
TGA
Ser
>WENV170026774
CDTY01006613
86860
Bacillota
TGA
Ser
>WENV170027872
CDTY01048772
8223
Bacillota
GCT
Ser
>WENV170027287
CDTY01025407
8223
Bacillota
GCT
Ser
>WENV170027433
CDTY01031124
270488
Bacillota
GTC
Asp
>WENV170026980
CDTY01014528
270488
Bacillota
GTC
Asp
>WENV170027784
CDTY01045367
779387
Bacillota
TTG
Gln
>WENV170026957
CDTY01013150
779387
Bacillota
TTG
Gln
>WENV170026605
CDTY01000152
779387
Bacillota
TTG
Gln
>WENV170027766
CDTY01044178
284731
Bacillota
GTC
Asp
>WENV170027691
CDTY01041787
284731
Bacillota
GTC
Asp
>WENV170027687
CDTY01041787
284731
Bacillota
GTC
Asp
>WENV170026676
CDTY01002974
465106
Bacillota
TGT
Thr
>WENV170027908
CDTY01050046
285831
Bacillota
GTC
Asp
>WENV170027169
CDTY01020751
285831
Bacillota
GTC
Asp
>WENV170027863
CDTY01048315
466790
Bacillota
CGG
Pro
>WENV170026886
CDTY01010663
466790
Bacillota
CGG
Pro
>WENV170026718
CDTY01005290
466790
Bacillota
CGG
Pro
>WENV170028058
CDTY01055436
270426
Bacillota
GAT
Ile
>WENV170027905
CDTY01050038
270426
Bacillota
GAT
Ile
>WENV170027932
CDTY01051022
451355
Bacillota
GAC
Val
>WENV170027888
CDTY01049216
451355
Bacillota
GAC
Val
>WENV170027020
CDTY01015549
451355
Bacillota
GAC
Val
>WENV170026614
CDTY01000866
451355
Bacillota
GAC
Val
>WENV170026633
CDTY01001339
456796
Bacillota
GGC
Ala
>WENV170027173
CDTY01021056
451377
Bacillota
TAC
Val
>WENV170026687
CDTY01003608
451377
Bacillota
TAC
Val
>WENV170027750
CDTY01044066
279224
Bacillota
GAT
Ile
>WENV170027352
CDTY01028331
279224
Bacillota
GAT
Ile
>WENV170027505
CDTY01033735
468336
Bacillota
GCC
Gly
>WENV170026712
CDTY01004512
468336
Bacillota
GCC
Gly
>WENV170027713
CDTY01042284
661851
Bacillota
GCA
Cys
>WENV170027565
CDTY01037015
661851
Bacillota
GCA
Cys
>WENV170027826
CDTY01046767
270438
Bacillota
TCT
Arg
>WENV170027463
CDTY01031916
270438
Bacillota
TCT
Arg
>WENV170027563
CDTY01036982
270438
Bacillota
TCT
Arg
>WENV170027156
CDTY01019941
451352
Bacillota
GGT
Thr
>WENV170026961
CDTY01013192
451352
Bacillota
GGT
Thr
>WENV170026960
CDTY01013192
451352
Bacillota
GGT
Thr
>WENV170026852
CDTY01009229
451352
Bacillota
GGT
Thr
>WENV170026700
CDTY01004021
451352
Bacillota
GGT
Thr
>WENV170027437
CDTY01031124
275959
Bacillota
CAT
Met
>WENV170028057
CDTY01055436
467963
Bacillota
TGC
Ala
>WENV170027828
CDTY01046767
112239
Bacillota
CAG
Leu
>WENV170027403
CDTY01030167
112239
Bacillota
CAG
Leu
>WENV170026861
CDTY01009371
112239
Bacillota
CAG
Leu
>WENV170027743
CDTY01043609
88702
Bacillota
CAG
Leu
>WENV170027742
CDTY01043609
88702
Bacillota
CAG
Leu
>WENV170027551
CDTY01035769
153689
Bacillota
GTA
Tyr
>WENV170027404
CDTY01030167
153689
Bacillota
GTA
Tyr
>WENV170026693
CDTY01003609
153689
Bacillota
GTA
Tyr
>WENV170027711
CDTY01042284
284668
Bacillota
GTC
Asp
>WENV170026959
CDTY01013192
284668
Bacillota
GTC
Asp
>WENV170026851
CDTY01009229
284668
Bacillota
GTC
Asp
>WENV170026688
CDTY01003608
284668
Bacillota
GTC
Asp
>WENV170026627
CDTY01000890
284668
Bacillota
GTC
Asp
>WENV170027186
CDTY01021576
274593
Bacillota
GAT
Ile
>WENV170027753
CDTY01044083
466782
Bacillota
CCC
Gly
>WENV170026923
CDTY01012396
466782
Bacillota
CCC
Gly
>WENV170026691
CDTY01003608
466782
Bacillota
CCC
Gly
>WENV170027693
CDTY01041787
661891
Bacillota
GCC
Gly
>WENV170027688
CDTY01041787
661891
Bacillota
GCC
Gly
>WENV170027313
CDTY01026974
661891
Bacillota
GCC
Gly
>WENV170027862
CDTY01048315
779385
Bacillota
CTG
Gln
>WENV170027267
CDTY01024602
779385
Bacillota
CTG
Gln
>WENV170027174
CDTY01021068
779385
Bacillota
CTG
Gln
>WENV170026977
CDTY01014179
779385
Bacillota
CTG
Gln
>WENV170026885
CDTY01010663
779385
Bacillota
CTG
Gln
>WENV170026853
CDTY01009237
779385
Bacillota
CTG
Gln
>WENV170026818
CDTY01008035
779385
Bacillota
CTG
Gln
>WENV170026717
CDTY01005290
779385
Bacillota
CTG
Gln
>WENV170027860
CDTY01048284
451357
Bacillota
CTT
Lys
>WENV170027191
CDTY01021905
451357
Bacillota
CTT
Lys
>WENV170026792
CDTY01007032
451357
Bacillota
CTT
Lys
>WENV170026685
CDTY01003574
451357
Bacillota
CTT
Lys
>WENV170026600
CDTY01000048
270546
Bacillota
CAT
Met
>WENV170026870
CDTY01009868
20504
Bacillota
GGA
Ser
>WENV170026624
CDTY01000890
20504
Bacillota
GGA
Ser
>WENV170027861
CDTY01048315
451384
Bacillota
TGG
Pro
>WENV170027659
CDTY01040833
451384
Bacillota
TGG
Pro
>WENV170027868
CDTY01048659
466773
Bacillota
GGC
Ala
>WENV170027783
CDTY01045367
466773
Bacillota
GGC
Ala
>WENV170027774
CDTY01044639
466773
Bacillota
GGC
Ala
>WENV170027756
CDTY01044096
466773
Bacillota
GGC
Ala
>WENV170026695
CDTY01003609
466773
Bacillota
GGC
Ala
>WENV170027689
CDTY01041787
466856
Bacillota
CCA
Trp
>WENV170027497
CDTY01033666
451375
Bacillota
GGC
Ala
>WENV170027366
CDTY01028395
451375
Bacillota
GGC
Ala
>WENV170027194
CDTY01022177
451375
Bacillota
GGC
Ala
>WENV170027167
CDTY01020573
451375
Bacillota
GGC
Ala
>WENV170028053
CDTY01055381
270447
Bacillota
GTT
Asn
>WENV170027874
CDTY01048772
270447
Bacillota
GTT
Asn
>WENV170027837
CDTY01047105
270447
Bacillota
GTT
Asn
>WENV170027228
CDTY01023286
270447
Bacillota
GTT
Asn
>WENV170026701
CDTY01004042
270447
Bacillota
GTT
Asn
>WENV170026694
CDTY01003609
270447
Bacillota
GTT
Asn
>WENV170027873
CDTY01048772
653369
Bacillota
CTC
Glu
>WENV170027859
CDTY01048284
653369
Bacillota
CTC
Glu
>WENV170027836
CDTY01047105
653369
Bacillota
CTC
Glu
>WENV170027227
CDTY01023286
653369
Bacillota
CTC
Glu
>WENV170026817
CDTY01007684
653369
Bacillota
CTC
Glu
>WENV170026684
CDTY01003574
653369
Bacillota
CTC
Glu
>WENV170027712
CDTY01042284
451376
Bacillota
GCC
Gly
>WENV170027710
CDTY01042284
451376
Bacillota
GCC
Gly
>WENV170027576
CDTY01037785
451376
Bacillota
GCC
Gly
>WENV170027564
CDTY01037015
451376
Bacillota
GCC
Gly
>WENV170027185
CDTY01021381
451376
Bacillota
GCC
Gly
>WENV170027172
CDTY01021056
451376
Bacillota
GCC
Gly
>WENV170026690
CDTY01003608
451376
Bacillota
GCC
Gly
>WENV170026686
CDTY01003608
451376
Bacillota
GCC
Gly
>WENV170026626
CDTY01000890
451376
Bacillota
GCC
Gly
>WENV170026658
CDTY01002249
653373
Bacillota
TTC
Glu
>WENV170027994
CDTY01053228
457194
Bacillota
TAC
Val
>WENV170027992
CDTY01053228
457194
Bacillota
TAC
Val
>WENV170027716
CDTY01042364
457194
Bacillota
TAC
Val
>WENV170027714
CDTY01042364
457194
Bacillota
TAC
Val
>WENV170027434
CDTY01031124
457194
Bacillota
TAC
Val
>WENV170027622
CDTY01039657
653347
Bacillota
TGT
Thr
>WENV170026692
CDTY01003609
653347
Bacillota
TGT
Thr
>WENV170027550
CDTY01035769
653347
Bacillota
TGT
Thr
>WENV170027483
CDTY01032757
270405
Bacillota
ACG
Arg
>WENV170027340
CDTY01027914
270405
Bacillota
ACG
Arg
>WENV170026602
CDTY01000048
270405
Bacillota
ACG
Arg
>WENV170027667
CDTY01041333
284784
Bacillota
GAT
Ile
>WENV170027629
CDTY01040393
285826
Bacillota
CAT
Met
>WENV170026752
CDTY01006221
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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