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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028454
CDYF01000114
270497
Bacteroidota
GTG
His
>WENV170028453
CDYF01000114
270497
Bacteroidota
GTG
His
>WENV170028472
CDYF01001373
653389
Bacteroidota
GGT
Thr
>WENV170028478
CDYF01001406
270514
Bacteroidota
GTT
Asn
>WENV170028477
CDYF01001406
270514
Bacteroidota
GTT
Asn
>WENV170028476
CDYF01001406
270514
Bacteroidota
GTT
Asn
>WENV170028475
CDYF01001406
270514
Bacteroidota
GTT
Asn
>WENV170028487
CDYF01001691
653343
Bacteroidota
CCT
Arg
>WENV170028504
CDYF01002681
153684
Bacteroidota
GTA
Tyr
>WENV170028505
CDYF01002694
270412
Bacteroidota
GTT
Asn
>WENV170028506
CDYF01002694
270412
Bacteroidota
GTT
Asn
>WENV170028507
CDYF01002694
270412
Bacteroidota
GTT
Asn
>WENV170028508
CDYF01002694
270412
Bacteroidota
GTT
Asn
>WENV170028510
CDYF01002694
153684
Bacteroidota
GTA
Tyr
>WENV170028515
CDYF01002739
153692
Bacteroidota
GTA
Tyr
>WENV170028523
CDYF01003103
30311
Bacteroidota
GGA
Ser
>WENV170028538
CDYF01003804
30567
Bacteroidota
GGA
Ser
>WENV170028542
CDYF01004001
653350
Bacteroidota
GCA
Cys
>WENV170028566
CDYF01004929
30567
Bacteroidota
GGA
Ser
>WENV170028572
CDYF01005246
241460
Bacteroidota
TAC
Val
>WENV170028580
CDYF01005807
113533
Bacteroidota
CAG
Leu
>WENV170028579
CDYF01005807
451389
Bacteroidota
GCC
Gly
>WENV170028582
CDYF01005877
783463
Bacteroidota
CTG
Gln
>WENV170028585
CDYF01006119
273341
Bacteroidota
TGC
Ala
>WENV170028591
CDYF01006672
451354
Bacteroidota
TTT
Lys
>WENV170028597
CDYF01006902
451478
Bacteroidota
TTT
Lys
>WENV170028600
CDYF01007239
30277
Bacteroidota
GGA
Ser
>WENV170028621
CDYF01008453
240600
Bacteroidota
GGG
Pro
>WENV170028625
CDYF01008523
153692
Bacteroidota
GTA
Tyr
>WENV170028632
CDYF01009357
451389
Bacteroidota
GCC
Gly
>WENV170028634
CDYF01009357
451389
Bacteroidota
GCC
Gly
>WENV170028639
CDYF01009639
277204
Bacteroidota
GTC
Asp
>WENV170028638
CDYF01009639
153692
Bacteroidota
GTA
Tyr
>WENV170028652
CDYF01010577
779393
Bacteroidota
TTG
Gln
>WENV170028653
CDYF01010579
284758
Bacteroidota
GAT
Ile
>WENV170028655
CDYF01010587
451354
Bacteroidota
TTT
Lys
>WENV170028665
CDYF01011129
281835
Bacteroidota
TGT
Thr
>WENV170028680
CDYF01011675
281835
Bacteroidota
TGT
Thr
>WENV170028693
CDYF01012326
451452
Bacteroidota
CCA
Trp
>WENV170028697
CDYF01012587
463028
Bacteroidota
CAT
Met
>WENV170028705
CDYF01012962
153692
Bacteroidota
GTA
Tyr
>WENV170028712
CDYF01013149
654770
Bacteroidota
GGT
Thr
>WENV170028714
CDYF01013149
658239
Bacteroidota
CTC
Glu
>WENV170028711
CDYF01013149
153692
Bacteroidota
GTA
Tyr
>WENV170028730
CDYF01013805
153684
Bacteroidota
GTA
Tyr
>WENV170028733
CDYF01014041
180313
Bacteroidota
TAG
Leu
>WENV170028745
CDYF01014399
463028
Bacteroidota
CAT
Met
>WENV170028752
CDYF01014705
451389
Bacteroidota
GCC
Gly
>WENV170028750
CDYF01014705
451389
Bacteroidota
GCC
Gly
>WENV170028762
CDYF01015227
653350
Bacteroidota
GCA
Cys
>WENV170028768
CDYF01015424
270514
Bacteroidota
GTT
Asn
>WENV170028780
CDYF01016163
451484
Bacteroidota
CAT
Met
>WENV170028784
CDYF01016168
779393
Bacteroidota
TTG
Gln
>WENV170028786
CDYF01016365
779393
Bacteroidota
TTG
Gln
>WENV170028787
CDYF01016433
653388
Bacteroidota
TTC
Glu
>WENV170028788
CDYF01016499
179905
Bacteroidota
TAG
Leu
>WENV170028795
CDYF01016852
30278
Bacteroidota
GGA
Ser
>WENV170028798
CDYF01017110
653350
Bacteroidota
GCA
Cys
>WENV170028832
CDYF01019120
112241
Bacteroidota
CAA
Leu
>WENV170028838
CDYF01019454
779393
Bacteroidota
TTG
Gln
>WENV170028853
CDYF01020039
653342
Bacteroidota
CCG
Arg
>WENV170028860
CDYF01020356
783463
Bacteroidota
CTG
Gln
>WENV170028873
CDYF01020585
113008
Bacteroidota
GAG
Leu
>WENV170028870
CDYF01020585
113008
Bacteroidota
GAG
Leu
>WENV170028867
CDYF01020585
113008
Bacteroidota
GAG
Leu
>WENV170028887
CDYF01021336
180313
Bacteroidota
TAG
Leu
>WENV170028889
CDYF01021485
240600
Bacteroidota
GGG
Pro
>WENV170028892
CDYF01022012
270492
Bacteroidota
GTG
His
>WENV170028895
CDYF01022521
218000
Bacteroidota
CAG
Leu
>WENV170028901
CDYF01022786
270497
Bacteroidota
GTG
His
>WENV170028900
CDYF01022786
270497
Bacteroidota
GTG
His
>WENV170028899
CDYF01022786
270497
Bacteroidota
GTG
His
>WENV170028909
CDYF01023158
273124
Bacteroidota
GTC
Asp
>WENV170028910
CDYF01023270
153684
Bacteroidota
GTA
Tyr
>WENV170028914
CDYF01023597
270494
Bacteroidota
CGG
Pro
>WENV170028940
CDYF01024201
451389
Bacteroidota
GCC
Gly
>WENV170028948
CDYF01024434
451360
Bacteroidota
CGT
Thr
>WENV170028954
CDYF01024610
653377
Bacteroidota
CTC
Glu
>WENV170028974
CDYF01025851
153692
Bacteroidota
GTA
Tyr
>WENV170028976
CDYF01026155
270412
Bacteroidota
GTT
Asn
>WENV170028977
CDYF01026155
270412
Bacteroidota
GTT
Asn
>WENV170028978
CDYF01026155
270412
Bacteroidota
GTT
Asn
>WENV170029002
CDYF01027406
113008
Bacteroidota
GAG
Leu
>WENV170029007
CDYF01027623
458644
Bacteroidota
CCC
Gly
>WENV170029015
CDYF01027736
653774
Bacteroidota
CAT
Met
>WENV170029014
CDYF01027736
653774
Bacteroidota
CAT
Met
>WENV170029035
CDYF01028357
653774
Bacteroidota
CAT
Met
>WENV170029049
CDYF01028680
653350
Bacteroidota
GCA
Cys
>WENV170029051
CDYF01028914
658239
Bacteroidota
CTC
Glu
>WENV170029052
CDYF01028948
86859
Bacteroidota
TGA
Ser
>WENV170029066
CDYF01029530
270542
Bacteroidota
CAT
Met
>WENV170029069
CDYF01029762
653774
Bacteroidota
CAT
Met
>WENV170029075
CDYF01030040
86857
Bacteroidota
TAA
Leu
>WENV170029073
CDYF01030040
653343
Bacteroidota
CCT
Arg
>WENV170029076
CDYF01030061
87355
Bacteroidota
TGA
Ser
>WENV170029082
CDYF01030315
270514
Bacteroidota
GTT
Asn
>WENV170029081
CDYF01030315
270514
Bacteroidota
GTT
Asn
>WENV170029098
CDYF01030627
451389
Bacteroidota
GCC
Gly
>WENV170029096
CDYF01030627
451389
Bacteroidota
GCC
Gly
>WENV170029094
CDYF01030627
451389
Bacteroidota
GCC
Gly
>WENV170029103
CDYF01030835
653774
Bacteroidota
CAT
Met
>WENV170029122
CDYF01031517
653350
Bacteroidota
GCA
Cys
>WENV170029138
CDYF01032403
87355
Bacteroidota
TGA
Ser
>WENV170029151
CDYF01033037
240600
Bacteroidota
GGG
Pro
>WENV170029177
CDYF01034170
270851
Bacteroidota
TCT
Arg
>WENV170029192
CDYF01034753
283437
Bacteroidota
TGT
Thr
>WENV170029193
CDYF01034759
653343
Bacteroidota
CCT
Arg
>WENV170029215
CDYF01035178
458644
Bacteroidota
CCC
Gly
>WENV170029250
CDYF01036038
660446
Bacteroidota
CCT
Arg
>WENV170029249
CDYF01036038
653388
Bacteroidota
TTC
Glu
>WENV170029248
CDYF01036038
653388
Bacteroidota
TTC
Glu
>WENV170029252
CDYF01036529
451389
Bacteroidota
GCC
Gly
>WENV170029254
CDYF01036582
86859
Bacteroidota
TGA
Ser
>WENV170029253
CDYF01036582
86859
Bacteroidota
TGA
Ser
>WENV170029256
CDYF01036763
779477
Bacteroidota
TTG
Gln
>WENV170029258
CDYF01036895
113533
Bacteroidota
CAG
Leu
>WENV170029266
CDYF01036921
451478
Bacteroidota
TTT
Lys
>WENV170029270
CDYF01037102
270514
Bacteroidota
GTT
Asn
>WENV170029285
CDYF01038423
30567
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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