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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037172
CDYQ01000002
451389
Bacteroidota
GCC
Gly
>WENV170037174
CDYQ01000002
451389
Bacteroidota
GCC
Gly
>WENV170037219
CDYQ01002672
653350
Bacteroidota
GCA
Cys
>WENV170037226
CDYQ01003037
153684
Bacteroidota
GTA
Tyr
>WENV170037266
CDYQ01004831
154983
Bacteroidota
GTA
Tyr
>WENV170037281
CDYQ01005928
782347
Bacteroidota
CTG
Gln
>WENV170037282
CDYQ01005928
30311
Bacteroidota
GGA
Ser
>WENV170037295
CDYQ01006261
270514
Bacteroidota
GTT
Asn
>WENV170037296
CDYQ01006261
270514
Bacteroidota
GTT
Asn
>WENV170037306
CDYQ01006636
653350
Bacteroidota
GCA
Cys
>WENV170037336
CDYQ01008333
653774
Bacteroidota
CAT
Met
>WENV170037345
CDYQ01008844
30567
Bacteroidota
GGA
Ser
>WENV170037364
CDYQ01009645
86859
Bacteroidota
TGA
Ser
>WENV170037368
CDYQ01009716
241460
Bacteroidota
TAC
Val
>WENV170037369
CDYQ01009716
241460
Bacteroidota
TAC
Val
>WENV170037388
CDYQ01010647
153692
Bacteroidota
GTA
Tyr
>WENV170037389
CDYQ01010656
270542
Bacteroidota
CAT
Met
>WENV170037410
CDYQ01012378
153684
Bacteroidota
GTA
Tyr
>WENV170037431
CDYQ01013014
653377
Bacteroidota
CTC
Glu
>WENV170037434
CDYQ01013170
218000
Bacteroidota
CAG
Leu
>WENV170037439
CDYQ01013179
270494
Bacteroidota
CGG
Pro
>WENV170037458
CDYQ01013604
779393
Bacteroidota
TTG
Gln
>WENV170037493
CDYQ01014010
463028
Bacteroidota
CAT
Met
>WENV170037500
CDYQ01014583
270491
Bacteroidota
GGC
Ala
>WENV170037542
CDYQ01016614
783463
Bacteroidota
CTG
Gln
>WENV170037567
CDYQ01017478
283437
Bacteroidota
TGT
Thr
>WENV170037580
CDYQ01017891
653350
Bacteroidota
GCA
Cys
>WENV170037589
CDYQ01018553
451389
Bacteroidota
GCC
Gly
>WENV170037591
CDYQ01018553
451389
Bacteroidota
GCC
Gly
>WENV170037628
CDYQ01020334
87355
Bacteroidota
TGA
Ser
>WENV170037629
CDYQ01020339
653350
Bacteroidota
GCA
Cys
>WENV170037642
CDYQ01020741
179905
Bacteroidota
TAG
Leu
>WENV170037659
CDYQ01021433
270418
Bacteroidota
GGC
Ala
>WENV170037661
CDYQ01021457
779477
Bacteroidota
TTG
Gln
>WENV170037662
CDYQ01021751
270542
Bacteroidota
CAT
Met
>WENV170037665
CDYQ01021783
277204
Bacteroidota
GTC
Asp
>WENV170037672
CDYQ01022114
180807
Bacteroidota
CAG
Leu
>WENV170037673
CDYQ01022114
113161
Bacteroidota
GAG
Leu
>WENV170037685
CDYQ01022238
653350
Bacteroidota
GCA
Cys
>WENV170037696
CDYQ01022755
270492
Bacteroidota
GTG
His
>WENV170037697
CDYQ01022755
30277
Bacteroidota
GGA
Ser
>WENV170037705
CDYQ01023299
653342
Bacteroidota
CCG
Arg
>WENV170037728
CDYQ01023927
451354
Bacteroidota
TTT
Lys
>WENV170037743
CDYQ01024340
779393
Bacteroidota
TTG
Gln
>WENV170037763
CDYQ01025771
153684
Bacteroidota
GTA
Tyr
>WENV170037765
CDYQ01025923
655465
Bacteroidota
TTC
Glu
>WENV170037767
CDYQ01026041
458130
Bacteroidota
TTT
Lys
>WENV170037775
CDYQ01026471
653343
Bacteroidota
CCT
Arg
>WENV170037785
CDYQ01027143
273124
Bacteroidota
GTC
Asp
>WENV170037791
CDYQ01027154
240600
Bacteroidota
GGG
Pro
>WENV170037813
CDYQ01028334
451484
Bacteroidota
CAT
Met
>WENV170037815
CDYQ01028367
270412
Bacteroidota
GTT
Asn
>WENV170037816
CDYQ01028367
270412
Bacteroidota
GTT
Asn
>WENV170037820
CDYQ01028708
653343
Bacteroidota
CCT
Arg
>WENV170037846
CDYQ01029439
218000
Bacteroidota
CAG
Leu
>WENV170037848
CDYQ01029439
218000
Bacteroidota
CAG
Leu
>WENV170037945
CDYQ01032764
653350
Bacteroidota
GCA
Cys
>WENV170037947
CDYQ01032890
470605
Bacteroidota
GAA
Phe
>WENV170037962
CDYQ01033871
86857
Bacteroidota
TAA
Leu
>WENV170037987
CDYQ01034443
72680
Bacteroidota
TAA
Leu
>WENV170038000
CDYQ01035092
780666
Bacteroidota
CTG
Gln
>WENV170038011
CDYQ01035504
451354
Bacteroidota
TTT
Lys
>WENV170038020
CDYQ01035787
180313
Bacteroidota
TAG
Leu
>WENV170038058
CDYQ01036920
87355
Bacteroidota
TGA
Ser
>WENV170038102
CDYQ01038668
270514
Bacteroidota
GTT
Asn
>WENV170038103
CDYQ01038668
270514
Bacteroidota
GTT
Asn
>WENV170038160
CDYQ01040146
783463
Bacteroidota
CTG
Gln
>WENV170038162
CDYQ01040148
451354
Bacteroidota
TTT
Lys
>WENV170038181
CDYQ01040906
653342
Bacteroidota
CCG
Arg
>WENV170038182
CDYQ01041280
782347
Bacteroidota
CTG
Gln
>WENV170038215
CDYQ01042344
451360
Bacteroidota
CGT
Thr
>WENV170038220
CDYQ01042613
451360
Bacteroidota
CGT
Thr
>WENV170038245
CDYQ01043753
458644
Bacteroidota
CCC
Gly
>WENV170038248
CDYQ01043767
451484
Bacteroidota
CAT
Met
>WENV170038276
CDYQ01044900
30278
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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