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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170038925
CDYR01026410
457039
Bacillota
GAA
Phe
>WENV170039069
CDYR01031696
457039
Bacillota
GAA
Phe
>WENV170038483
CDYR01009642
468330
Bacillota
GTT
Asn
>WENV170038674
CDYR01017785
468330
Bacillota
GTT
Asn
>WENV170039569
CDYR01048026
468330
Bacillota
GTT
Asn
>WENV170038317
CDYR01002406
451336
Bacillota
GAA
Phe
>WENV170038599
CDYR01014740
466895
Bacillota
TGC
Ala
>WENV170039572
CDYR01048038
281523
Bacillota
CCT
Arg
>WENV170038664
CDYR01016903
275710
Bacillota
CCG
Arg
>WENV170038908
CDYR01025664
270416
Bacillota
CAC
Val
>WENV170038415
CDYR01006813
183038
Bacillota
GTA
Tyr
>WENV170039189
CDYR01035358
653346
Bacillota
TTC
Glu
>WENV170039441
CDYR01043476
270436
Bacillota
GTG
His
>WENV170039226
CDYR01035724
270436
Bacillota
GTG
His
>WENV170038560
CDYR01012852
86860
Bacillota
TGA
Ser
>WENV170039219
CDYR01035724
270488
Bacillota
GTC
Asp
>WENV170039205
CDYR01035399
270488
Bacillota
GTC
Asp
>WENV170038480
CDYR01009568
779387
Bacillota
TTG
Gln
>WENV170038797
CDYR01020654
284731
Bacillota
GTC
Asp
>WENV170038394
CDYR01005640
284731
Bacillota
GTC
Asp
>WENV170038392
CDYR01005640
284731
Bacillota
GTC
Asp
>WENV170039013
CDYR01029864
655659
Bacillota
CTG
Gln
>WENV170039332
CDYR01039269
465106
Bacillota
TGT
Thr
>WENV170038619
CDYR01015269
465106
Bacillota
TGT
Thr
>WENV170039228
CDYR01035724
451373
Bacillota
TTT
Lys
>WENV170039211
CDYR01035399
451373
Bacillota
TTT
Lys
>WENV170039618
CDYR01050130
270426
Bacillota
GAT
Ile
>WENV170038811
CDYR01021417
270426
Bacillota
GAT
Ile
>WENV170038401
CDYR01006364
270426
Bacillota
GAT
Ile
>WENV170038340
CDYR01003747
270426
Bacillota
GAT
Ile
>WENV170039174
CDYR01035102
451367
Bacillota
TAC
Val
>WENV170039387
CDYR01041651
451355
Bacillota
GAC
Val
>WENV170039571
CDYR01048037
653367
Bacillota
CTC
Glu
>WENV170039296
CDYR01038199
653367
Bacillota
CTC
Glu
>WENV170038918
CDYR01026033
653367
Bacillota
CTC
Glu
>WENV170038728
CDYR01019237
468336
Bacillota
GCC
Gly
>WENV170039454
CDYR01043904
660198
Bacillota
GCC
Gly
>WENV170038990
CDYR01028664
660198
Bacillota
GCC
Gly
>WENV170038924
CDYR01026408
660198
Bacillota
GCC
Gly
>WENV170039149
CDYR01033936
270438
Bacillota
TCT
Arg
>WENV170039617
CDYR01050130
467963
Bacillota
TGC
Ala
>WENV170039595
CDYR01048965
451398
Bacillota
TGC
Ala
>WENV170038384
CDYR01005445
88702
Bacillota
CAG
Leu
>WENV170038383
CDYR01005445
88702
Bacillota
CAG
Leu
>WENV170038382
CDYR01005445
88702
Bacillota
CAG
Leu
>WENV170038360
CDYR01004428
88702
Bacillota
CAG
Leu
>WENV170038359
CDYR01004428
88702
Bacillota
CAG
Leu
>WENV170038358
CDYR01004428
88702
Bacillota
CAG
Leu
>WENV170038299
CDYR01001595
86865
Bacillota
AAG
Leu
>WENV170038324
CDYR01002500
86865
Bacillota
AAG
Leu
>WENV170038696
CDYR01018191
286459
Bacillota
CAT
Met
>WENV170039486
CDYR01044991
779389
Bacillota
TCC
Gly
>WENV170039439
CDYR01043476
779389
Bacillota
TCC
Gly
>WENV170039259
CDYR01036607
779389
Bacillota
TCC
Gly
>WENV170038926
CDYR01026410
779389
Bacillota
TCC
Gly
>WENV170039016
CDYR01029864
779389
Bacillota
TCC
Gly
>WENV170039224
CDYR01035724
779389
Bacillota
TCC
Gly
>WENV170039440
CDYR01043476
275792
Bacillota
TCT
Arg
>WENV170039252
CDYR01036320
284661
Bacillota
CAT
Met
>WENV170038810
CDYR01021341
284661
Bacillota
CAT
Met
>WENV170038598
CDYR01014740
274593
Bacillota
GAT
Ile
>WENV170038676
CDYR01017785
270421
Bacillota
GTC
Asp
>WENV170039208
CDYR01035399
179909
Bacillota
GTA
Tyr
>WENV170038622
CDYR01015271
179909
Bacillota
GTA
Tyr
>WENV170038806
CDYR01021036
661891
Bacillota
GCC
Gly
>WENV170038395
CDYR01005640
661891
Bacillota
GCC
Gly
>WENV170038283
CDYR01000162
661891
Bacillota
GCC
Gly
>WENV170039453
CDYR01043904
282437
Bacillota
GTC
Asp
>WENV170038988
CDYR01028664
282437
Bacillota
GTC
Asp
>WENV170039295
CDYR01038199
451406
Bacillota
CTT
Lys
>WENV170039242
CDYR01036123
451406
Bacillota
CTT
Lys
>WENV170039497
CDYR01045150
270546
Bacillota
CAT
Met
>WENV170039188
CDYR01035358
270546
Bacillota
CAT
Met
>WENV170038752
CDYR01019779
20504
Bacillota
GGA
Ser
>WENV170038396
CDYR01005640
466856
Bacillota
CCA
Trp
>WENV170039215
CDYR01035541
451375
Bacillota
GGC
Ala
>WENV170038939
CDYR01026844
451375
Bacillota
GGC
Ala
>WENV170038808
CDYR01021241
451375
Bacillota
GGC
Ala
>WENV170039641
CDYR01050992
270447
Bacillota
GTT
Asn
>WENV170038613
CDYR01015261
451376
Bacillota
GCC
Gly
>WENV170038318
CDYR01002406
451376
Bacillota
GCC
Gly
>WENV170038411
CDYR01006812
780781
Bacillota
TCC
Gly
>WENV170039460
CDYR01044250
458649
Bacillota
GCC
Gly
>WENV170039459
CDYR01044250
458649
Bacillota
GCC
Gly
>WENV170039424
CDYR01043387
458649
Bacillota
GCC
Gly
>WENV170039066
CDYR01031411
458649
Bacillota
GCC
Gly
>WENV170038403
CDYR01006392
458649
Bacillota
GCC
Gly
>WENV170038949
CDYR01027255
780500
Bacillota
CCA
Trp
>WENV170039436
CDYR01043476
115212
Bacillota
TAA
Leu
>WENV170038678
CDYR01017785
115212
Bacillota
TAA
Leu
>WENV170038416
CDYR01006813
115212
Bacillota
TAA
Leu
>WENV170038603
CDYR01014780
284784
Bacillota
GAT
Ile
>WENV170039015
CDYR01029864
451372
Bacillota
GAA
Phe
>WENV170039210
CDYR01035399
451372
Bacillota
GAA
Phe
>WENV170038325
CDYR01002500
113007
Bacillota
CAG
Leu
>WENV170038726
CDYR01019117
113007
Bacillota
CAG
Leu
>WENV170039014
CDYR01029864
72675
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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