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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170046530
CDYY01040710
451336
Bacillota
GAA
Phe
>WENV170046156
CDYY01023568
275710
Bacillota
CCG
Arg
>WENV170046497
CDYY01039241
270416
Bacillota
CAC
Val
>WENV170046665
CDYY01045737
270416
Bacillota
CAC
Val
>WENV170046734
CDYY01048506
270416
Bacillota
CAC
Val
>WENV170046814
CDYY01053653
270416
Bacillota
CAC
Val
>WENV170046124
CDYY01022768
455828
Bacillota
TAC
Val
>WENV170046341
CDYY01032950
455828
Bacillota
TAC
Val
>WENV170046308
CDYY01031555
653346
Bacillota
TTC
Glu
>WENV170045770
CDYY01006708
270436
Bacillota
GTG
His
>WENV170045848
CDYY01009619
86860
Bacillota
TGA
Ser
>WENV170046256
CDYY01028695
8223
Bacillota
GCT
Ser
>WENV170045849
CDYY01009619
8223
Bacillota
GCT
Ser
>WENV170046296
CDYY01031018
779387
Bacillota
TTG
Gln
>WENV170046089
CDYY01020868
779387
Bacillota
TTG
Gln
>WENV170045953
CDYY01015181
779387
Bacillota
TTG
Gln
>WENV170046157
CDYY01023620
465106
Bacillota
TGT
Thr
>WENV170045796
CDYY01007553
466790
Bacillota
CGG
Pro
>WENV170045800
CDYY01007603
270426
Bacillota
GAT
Ile
>WENV170045662
CDYY01001648
270426
Bacillota
GAT
Ile
>WENV170046620
CDYY01044081
451367
Bacillota
TAC
Val
>WENV170045737
CDYY01005410
451355
Bacillota
GAC
Val
>WENV170046498
CDYY01039365
653367
Bacillota
CTC
Glu
>WENV170046051
CDYY01018960
468336
Bacillota
GCC
Gly
>WENV170045954
CDYY01015181
661851
Bacillota
GCA
Cys
>WENV170046075
CDYY01020152
270438
Bacillota
TCT
Arg
>WENV170046160
CDYY01023674
451352
Bacillota
GGT
Thr
>WENV170046062
CDYY01019255
451352
Bacillota
GGT
Thr
>WENV170046354
CDYY01033399
275959
Bacillota
CAT
Met
>WENV170045799
CDYY01007603
467963
Bacillota
TGC
Ala
>WENV170045827
CDYY01008617
112239
Bacillota
CAG
Leu
>WENV170046612
CDYY01044031
451398
Bacillota
TGC
Ala
>WENV170046663
CDYY01045681
88702
Bacillota
CAG
Leu
>WENV170046662
CDYY01045681
88702
Bacillota
CAG
Leu
>WENV170045685
CDYY01003377
465093
Bacillota
GCC
Gly
>WENV170046527
CDYY01040362
779389
Bacillota
TCC
Gly
>WENV170046219
CDYY01027350
779389
Bacillota
TCC
Gly
>WENV170046072
CDYY01019807
779389
Bacillota
TCC
Gly
>WENV170045637
CDYY01000058
779389
Bacillota
TCC
Gly
>WENV170046445
CDYY01036643
284661
Bacillota
CAT
Met
>WENV170046159
CDYY01023674
284668
Bacillota
GTC
Asp
>WENV170046286
CDYY01029945
466782
Bacillota
CCC
Gly
>WENV170046655
CDYY01045400
779385
Bacillota
CTG
Gln
>WENV170045795
CDYY01007553
779385
Bacillota
CTG
Gln
>WENV170046438
CDYY01036210
451357
Bacillota
CTT
Lys
>WENV170045766
CDYY01006645
451414
Bacillota
TGC
Ala
>WENV170046727
CDYY01048451
274813
Bacillota
ACG
Arg
>WENV170046353
CDYY01033344
279706
Bacillota
GAT
Ile
>WENV170046795
CDYY01052522
20504
Bacillota
GGA
Ser
>WENV170045885
CDYY01011093
20504
Bacillota
GGA
Ser
>WENV170046107
CDYY01021932
73357
Bacillota
TGA
Ser
>WENV170046008
CDYY01017272
451384
Bacillota
TGG
Pro
>WENV170046762
CDYY01050846
270447
Bacillota
GTT
Asn
>WENV170046743
CDYY01049566
270447
Bacillota
GTT
Asn
>WENV170046596
CDYY01043542
270447
Bacillota
GTT
Asn
>WENV170045896
CDYY01011601
653369
Bacillota
CTC
Glu
>WENV170046253
CDYY01028662
270399
Bacillota
GAT
Ile
>WENV170046128
CDYY01022989
451376
Bacillota
GCC
Gly
>WENV170045725
CDYY01004983
653373
Bacillota
TTC
Glu
>WENV170046252
CDYY01028662
451344
Bacillota
TGC
Ala
>WENV170045846
CDYY01009581
451344
Bacillota
TGC
Ala
>WENV170045736
CDYY01005159
458649
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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