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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170056630
CDZG01008944
270507
Bacillota
GTC
Asp
>WENV170057202
CDZG01029237
451336
Bacillota
GAA
Phe
>WENV170056432
CDZG01001144
275613
Bacillota
GTG
His
>WENV170057030
CDZG01023545
275710
Bacillota
CCG
Arg
>WENV170057155
CDZG01027461
270416
Bacillota
CAC
Val
>WENV170058150
CDZG01064530
455828
Bacillota
TAC
Val
>WENV170057126
CDZG01026696
653346
Bacillota
TTC
Glu
>WENV170057591
CDZG01043495
86860
Bacillota
TGA
Ser
>WENV170057592
CDZG01043495
8223
Bacillota
GCT
Ser
>WENV170056786
CDZG01015128
282520
Bacillota
TCT
Arg
>WENV170057516
CDZG01040651
779387
Bacillota
TTG
Gln
>WENV170057374
CDZG01036037
465106
Bacillota
TGT
Thr
>WENV170057117
CDZG01026636
465106
Bacillota
TGT
Thr
>WENV170057036
CDZG01024075
465106
Bacillota
TGT
Thr
>WENV170058122
CDZG01063866
285831
Bacillota
GTC
Asp
>WENV170057216
CDZG01029826
285831
Bacillota
GTC
Asp
>WENV170056479
CDZG01002876
285831
Bacillota
GTC
Asp
>WENV170057416
CDZG01038368
466790
Bacillota
CGG
Pro
>WENV170058173
CDZG01065509
270426
Bacillota
GAT
Ile
>WENV170057484
CDZG01039992
270426
Bacillota
GAT
Ile
>WENV170056603
CDZG01008004
270426
Bacillota
GAT
Ile
>WENV170057666
CDZG01045763
451367
Bacillota
TAC
Val
>WENV170057215
CDZG01029826
451367
Bacillota
TAC
Val
>WENV170057180
CDZG01028211
451367
Bacillota
TAC
Val
>WENV170056693
CDZG01011999
451355
Bacillota
GAC
Val
>WENV170056905
CDZG01019115
451355
Bacillota
GAC
Val
>WENV170057357
CDZG01035323
279224
Bacillota
GAT
Ile
>WENV170057266
CDZG01031792
72851
Bacillota
TGA
Ser
>WENV170056802
CDZG01015533
270438
Bacillota
TCT
Arg
>WENV170056590
CDZG01007561
451352
Bacillota
GGT
Thr
>WENV170057652
CDZG01045144
275959
Bacillota
CAT
Met
>WENV170056552
CDZG01006964
275959
Bacillota
CAT
Met
>WENV170057618
CDZG01044141
112239
Bacillota
CAG
Leu
>WENV170057440
CDZG01038868
451398
Bacillota
TGC
Ala
>WENV170057669
CDZG01045763
465093
Bacillota
GCC
Gly
>WENV170057183
CDZG01028211
465093
Bacillota
GCC
Gly
>WENV170057454
CDZG01039462
653349
Bacillota
GCC
Gly
>WENV170057093
CDZG01025670
653349
Bacillota
GCC
Gly
>WENV170057595
CDZG01043521
779389
Bacillota
TCC
Gly
>WENV170056940
CDZG01020852
779389
Bacillota
TCC
Gly
>WENV170056593
CDZG01007907
779389
Bacillota
TCC
Gly
>WENV170056431
CDZG01001144
275792
Bacillota
TCT
Arg
>WENV170057659
CDZG01045248
653398
Bacillota
CTC
Glu
>WENV170056948
CDZG01020927
466782
Bacillota
CCC
Gly
>WENV170056973
CDZG01021636
661891
Bacillota
GCC
Gly
>WENV170056491
CDZG01003982
661891
Bacillota
GCC
Gly
>WENV170057898
CDZG01056227
779385
Bacillota
CTG
Gln
>WENV170057415
CDZG01038368
779385
Bacillota
CTG
Gln
>WENV170057929
CDZG01057343
451357
Bacillota
CTT
Lys
>WENV170057689
CDZG01046729
451357
Bacillota
CTT
Lys
>WENV170057256
CDZG01031295
451414
Bacillota
TGC
Ala
>WENV170056596
CDZG01007953
279706
Bacillota
GAT
Ile
>WENV170057125
CDZG01026696
270546
Bacillota
CAT
Met
>WENV170056761
CDZG01014674
20504
Bacillota
GGA
Ser
>WENV170057803
CDZG01052052
451384
Bacillota
TGG
Pro
>WENV170058158
CDZG01065019
451375
Bacillota
GGC
Ala
>WENV170057537
CDZG01041530
451375
Bacillota
GGC
Ala
>WENV170057092
CDZG01025654
451375
Bacillota
GGC
Ala
>WENV170056858
CDZG01017829
451375
Bacillota
GGC
Ala
>WENV170056822
CDZG01016258
451375
Bacillota
GGC
Ala
>WENV170057736
CDZG01048903
270447
Bacillota
GTT
Asn
>WENV170056797
CDZG01015285
270447
Bacillota
GTT
Asn
>WENV170056698
CDZG01012073
270447
Bacillota
GTT
Asn
>WENV170056707
CDZG01012599
461574
Bacillota
TGT
Thr
>WENV170056610
CDZG01008008
461574
Bacillota
TGT
Thr
>WENV170057928
CDZG01057343
653369
Bacillota
CTC
Glu
>WENV170056796
CDZG01015285
653369
Bacillota
CTC
Glu
>WENV170057964
CDZG01058599
451376
Bacillota
GCC
Gly
>WENV170057334
CDZG01034310
458649
Bacillota
GCC
Gly
>WENV170057840
CDZG01053608
457194
Bacillota
TAC
Val
>WENV170056549
CDZG01006964
457194
Bacillota
TAC
Val
>WENV170057909
CDZG01056335
451334
Bacillota
TGT
Thr
>WENV170057441
CDZG01038872
451334
Bacillota
TGT
Thr
>WENV170057530
CDZG01041078
653347
Bacillota
TGT
Thr
>WENV170056842
CDZG01017282
270405
Bacillota
ACG
Arg
>WENV170057873
CDZG01054568
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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