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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058506
CDZH01011632
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170059343
CDZH01043708
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170060099
CDZH01074023
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170060100
CDZH01074023
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170059257
CDZH01040631
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170059258
CDZH01040631
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170059259
CDZH01040631
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170059511
CDZH01050195
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170058261
CDZH01002073
471981
Thermodesulfobacteriota
GGC
Ala
>WENV170059877
CDZH01065306
471981
Thermodesulfobacteriota
GGC
Ala
>WENV170060179
CDZH01077782
285948
Thermodesulfobacteriota
GTC
Asp
>WENV170060038
CDZH01071910
471975
Thermodesulfobacteriota
GAA
Phe
>WENV170059212
CDZH01038418
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170059182
CDZH01036722
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170059087
CDZH01033800
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170058482
CDZH01010684
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170058444
CDZH01008742
288741
Thermodesulfobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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