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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070861
CDZQ01038014
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170070763
CDZQ01035510
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170071452
CDZQ01057267
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170071144
CDZQ01047061
462769
Thermodesulfobacteriota
GTT
Asn
>WENV170069832
CDZQ01004688
471975
Thermodesulfobacteriota
GAA
Phe
>WENV170070757
CDZQ01035416
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170071124
CDZQ01046250
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170071253
CDZQ01050222
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170070626
CDZQ01030998
299716
Thermodesulfobacteriota
GGG
Pro
>WENV170071043
CDZQ01044327
299716
Thermodesulfobacteriota
GGG
Pro
>WENV170071103
CDZQ01045756
299716
Thermodesulfobacteriota
GGG
Pro
>WENV170071240
CDZQ01050103
284595
Thermodesulfobacteriota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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