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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170119210
CENJ01120590
275828
Alphaproteobacteria
GTC
Asp
>WENV170119489
CENJ01146817
452917
Alphaproteobacteria
TAC
Val
>WENV170119372
CENJ01136105
452884
Alphaproteobacteria
CCA
Trp
>WENV170118137
CENJ01047077
270887
Alphaproteobacteria
TGG
Pro
>WENV170118624
CENJ01078029
270887
Alphaproteobacteria
TGG
Pro
>WENV170119427
CENJ01141279
270887
Alphaproteobacteria
TGG
Pro
>WENV170119801
CENJ01164708
270887
Alphaproteobacteria
TGG
Pro
>WENV170120228
CENJ01235884
291540
Alphaproteobacteria
TGG
Pro
>WENV170118579
CENJ01074944
218220
Alphaproteobacteria
>WENV170118677
CENJ01082163
218220
Alphaproteobacteria
>WENV170118233
CENJ01052251
655270
Alphaproteobacteria
GAA
Phe
>WENV170118818
CENJ01091038
655270
Alphaproteobacteria
GAA
Phe
>WENV170117340
CENJ01006893
653538
Alphaproteobacteria
TTC
Glu
>WENV170117536
CENJ01016160
452895
Alphaproteobacteria
TGC
Ala
>WENV170117590
CENJ01018499
655359
Alphaproteobacteria
GAC
Val
>WENV170119196
CENJ01119893
451742
Alphaproteobacteria
GGC
Ala
>WENV170118743
CENJ01086517
653813
Alphaproteobacteria
GAC
Val
>WENV170119209
CENJ01120590
270796
Alphaproteobacteria
GTC
Asp
>WENV170117440
CENJ01011910
154064
Alphaproteobacteria
CAG
Leu
>WENV170117485
CENJ01013207
273603
Alphaproteobacteria
TGG
Pro
>WENV170117449
CENJ01012243
655271
Alphaproteobacteria
GGT
Thr
>WENV170118705
CENJ01083950
655271
Alphaproteobacteria
GGT
Thr
>WENV170118165
CENJ01048181
274133
Alphaproteobacteria
ACG
Arg
>WENV170118381
CENJ01062858
271956
Alphaproteobacteria
CAT
Met
>WENV170117987
CENJ01040409
656140
Alphaproteobacteria
GAC
Val
>WENV170117795
CENJ01029819
112802
Alphaproteobacteria
GAG
Leu
>WENV170119145
CENJ01116040
780582
Alphaproteobacteria
TCC
Gly
>WENV170117858
CENJ01033831
270777
Alphaproteobacteria
CAT
Met
>WENV170119974
CENJ01171994
301299
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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