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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170143951
CENY01111345
455289
Alphaproteobacteria
TTT
Lys
>WENV170145446
CENY01341401
780331
Alphaproteobacteria
TCC
Gly
>WENV170143510
CENY01076766
274224
Alphaproteobacteria
CAT
Met
>WENV170143978
CENY01113239
655363
Alphaproteobacteria
GGT
Thr
>WENV170143325
CENY01063701
273451
Alphaproteobacteria
GTG
His
>WENV170143850
CENY01101954
274039
Alphaproteobacteria
CAT
Met
>WENV170142675
CENY01021977
273803
Alphaproteobacteria
CCT
Arg
>WENV170144268
CENY01139564
455360
Alphaproteobacteria
CGC
Ala
>WENV170143152
CENY01052278
655361
Alphaproteobacteria
GCC
Gly
>WENV170143193
CENY01055643
655271
Alphaproteobacteria
GGT
Thr
>WENV170144463
CENY01153250
780346
Alphaproteobacteria
CTG
Gln
>WENV170145456
CENY01342560
454504
Alphaproteobacteria
CAT
Met
>WENV170143308
CENY01062774
656140
Alphaproteobacteria
GAC
Val
>WENV170142833
CENY01030734
454318
Alphaproteobacteria
GGC
Ala
>WENV170144687
CENY01167123
454318
Alphaproteobacteria
GGC
Ala
>WENV170145554
CENY01351643
31090
Alphaproteobacteria
GGA
Ser
>WENV170145157
CENY01263202
454433
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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