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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170170342
CEOP01454450
113485
Gammaproteobacteria
CAA
Leu
>WENV170168613
CEOP01106971
274150
Gammaproteobacteria
CAT
Met
>WENV170170179
CEOP01386389
271287
Gammaproteobacteria
CAT
Met
>WENV170168580
CEOP01104659
276972
Gammaproteobacteria
CCA
Trp
>WENV170169909
CEOP01245438
284535
Gammaproteobacteria
CCG
Arg
>WENV170168717
CEOP01116305
270982
Gammaproteobacteria
GAT
Ile
>WENV170168807
CEOP01123705
270982
Gammaproteobacteria
GAT
Ile
>WENV170169427
CEOP01202335
270982
Gammaproteobacteria
GAT
Ile
>WENV170167928
CEOP01048132
467367
Gammaproteobacteria
GGT
Thr
>WENV170169354
CEOP01193293
459731
Gammaproteobacteria
GGT
Thr
>WENV170169212
CEOP01173827
459731
Gammaproteobacteria
GGT
Thr
>WENV170168467
CEOP01093003
459731
Gammaproteobacteria
GGT
Thr
>WENV170169782
CEOP01237001
457171
Gammaproteobacteria
GTT
Asn
>WENV170168900
CEOP01136529
454397
Gammaproteobacteria
TGT
Thr
>WENV170167922
CEOP01047971
458351
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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