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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170201900
CEPQ01058078
655167
Alphaproteobacteria
TTC
Glu
>WENV170201343
CEPQ01014086
46086
Alphaproteobacteria
CGA
Ser
>WENV170201475
CEPQ01023619
455289
Alphaproteobacteria
TTT
Lys
>WENV170201332
CEPQ01012324
30553
Alphaproteobacteria
GGA
Ser
>WENV170201293
CEPQ01007528
780331
Alphaproteobacteria
TCC
Gly
>WENV170201748
CEPQ01048749
273447
Alphaproteobacteria
CCT
Arg
>WENV170201726
CEPQ01047762
274224
Alphaproteobacteria
CAT
Met
>WENV170201856
CEPQ01054348
452894
Alphaproteobacteria
CCA
Trp
>WENV170201297
CEPQ01008129
19999
Alphaproteobacteria
GCT
Ser
>WENV170202096
CEPQ01116293
655363
Alphaproteobacteria
GGT
Thr
>WENV170202158
CEPQ01124453
274144
Alphaproteobacteria
GTG
His
>WENV170201464
CEPQ01023079
455172
Alphaproteobacteria
GGC
Ala
>WENV170201436
CEPQ01020224
273450
Alphaproteobacteria
TCT
Arg
>WENV170201351
CEPQ01014592
274138
Alphaproteobacteria
CAT
Met
>WENV170202000
CEPQ01096647
454512
Alphaproteobacteria
CCA
Trp
>WENV170201162
CEPQ01000609
455360
Alphaproteobacteria
CGC
Ala
>WENV170201526
CEPQ01028133
780346
Alphaproteobacteria
CTG
Gln
>WENV170202077
CEPQ01112463
112839
Alphaproteobacteria
CAG
Leu
>WENV170201492
CEPQ01025532
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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