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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170234156
CEQK01014190
275457
Gammaproteobacteria
ACG
Arg
>WENV170234219
CEQK01023196
457453
Gammaproteobacteria
TTT
Lys
>WENV170234232
CEQK01026068
273863
Gammaproteobacteria
GGG
Pro
>WENV170234222
CEQK01023902
454971
Gammaproteobacteria
TTT
Lys
>WENV170234538
CEQK01079340
454971
Gammaproteobacteria
TTT
Lys
>WENV170234153
CEQK01013990
452415
Gammaproteobacteria
GTG
His
>WENV170234277
CEQK01033086
780242
Gammaproteobacteria
GCA
Cys
>WENV170234142
CEQK01012064
30353
Gammaproteobacteria
GGA
Ser
>WENV170234636
CEQK01117935
454388
Gammaproteobacteria
TAC
Val
>WENV170234152
CEQK01013860
452416
Gammaproteobacteria
TTT
Lys
>WENV170234101
CEQK01006740
273756
Gammaproteobacteria
TGG
Pro
>WENV170234059
CEQK01001783
276185
Gammaproteobacteria
TGG
Pro
>WENV170234185
CEQK01017213
271460
Gammaproteobacteria
CGG
Pro
>WENV170234311
CEQK01038378
112371
Gammaproteobacteria
CAA
Leu
>WENV170234278
CEQK01033086
112817
Gammaproteobacteria
TAA
Leu
>WENV170234168
CEQK01014956
452414
Gammaproteobacteria
TTC
Glu
>WENV170234143
CEQK01012218
30354
Gammaproteobacteria
TGA
Ser
>WENV170234468
CEQK01067011
271455
Gammaproteobacteria
GAC
Val
>WENV170234524
CEQK01077054
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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