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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170249279
CEQS01002261
454866
Gammaproteobacteria
TAC
Val
>WENV170249654
CEQS01028426
457453
Gammaproteobacteria
TTT
Lys
>WENV170249613
CEQS01025402
46027
Gammaproteobacteria
GGA
Ser
>WENV170249369
CEQS01008606
656944
Gammaproteobacteria
CCT
Arg
>WENV170249365
CEQS01007973
281965
Gammaproteobacteria
TCT
Arg
>WENV170249350
CEQS01007381
278942
Gammaproteobacteria
CCG
Arg
>WENV170249344
CEQS01007008
272023
Gammaproteobacteria
GAT
Ile
>WENV170249428
CEQS01012236
454859
Gammaproteobacteria
GAA
Phe
>WENV170249534
CEQS01020530
273752
Gammaproteobacteria
CAT
Met
>WENV170249787
CEQS01039859
454967
Gammaproteobacteria
TTT
Lys
>WENV170249313
CEQS01005169
276971
Gammaproteobacteria
ACG
Arg
>WENV170249253
CEQS01000765
463262
Gammaproteobacteria
TTT
Lys
>WENV170250215
CEQS01072759
273847
Gammaproteobacteria
CCT
Arg
>WENV170250061
CEQS01064796
273857
Gammaproteobacteria
TGG
Pro
>WENV170249364
CEQS01007973
273756
Gammaproteobacteria
TGG
Pro
>WENV170250470
CEQS01146883
273844
Gammaproteobacteria
CCG
Arg
>WENV170249363
CEQS01007887
273749
Gammaproteobacteria
CCA
Trp
>WENV170250363
CEQS01110463
456269
Gammaproteobacteria
GTG
His
>WENV170249697
CEQS01031159
459789
Gammaproteobacteria
GTT
Asn
>WENV170249300
CEQS01004437
31212
Gammaproteobacteria
TGA
Ser
>WENV170249416
CEQS01011024
282333
Gammaproteobacteria
GAC
Val
>WENV170250454
CEQS01142811
114536
Gammaproteobacteria
CAA
Leu
>WENV170249277
CEQS01002016
452412
Gammaproteobacteria
GCC
Gly
>WENV170250272
CEQS01076468
218101
Gammaproteobacteria
GTA
Tyr
>WENV170250000
CEQS01059617
30520
Gammaproteobacteria
TGA
Ser
>WENV170249374
CEQS01008947
30516
Gammaproteobacteria
TGA
Ser
>WENV170249315
CEQS01005331
30516
Gammaproteobacteria
TGA
Ser
>WENV170249299
CEQS01004437
30516
Gammaproteobacteria
TGA
Ser
>WENV170249739
CEQS01034374
273753
Gammaproteobacteria
ACG
Arg
>WENV170249740
CEQS01034374
273753
Gammaproteobacteria
ACG
Arg
>WENV170250062
CEQS01064796
273858
Gammaproteobacteria
TCT
Arg
>WENV170249750
CEQS01035117
180482
Gammaproteobacteria
GAG
Leu
>WENV170249280
CEQS01002261
454864
Gammaproteobacteria
TAC
Val
>WENV170249281
CEQS01002261
454864
Gammaproteobacteria
TAC
Val
>WENV170249551
CEQS01021993
454864
Gammaproteobacteria
TAC
Val
>WENV170250242
CEQS01073804
274148
Gammaproteobacteria
GTC
Asp
>WENV170249769
CEQS01037649
781121
Gammaproteobacteria
GCA
Cys
>WENV170249806
CEQS01040729
459731
Gammaproteobacteria
GGT
Thr
>WENV170249765
CEQS01036962
113485
Gammaproteobacteria
CAA
Leu
>WENV170250095
CEQS01067182
452881
Gammaproteobacteria
TGT
Thr
>WENV170249662
CEQS01028875
454969
Gammaproteobacteria
GTT
Asn
>WENV170249685
CEQS01029872
273845
Gammaproteobacteria
GGG
Pro
>WENV170249738
CEQS01034315
276972
Gammaproteobacteria
CCA
Trp
>WENV170249505
CEQS01017940
273852
Gammaproteobacteria
GTC
Asp
>WENV170249494
CEQS01017445
275001
Gammaproteobacteria
GAT
Ile
>WENV170249965
CEQS01056888
454397
Gammaproteobacteria
TGT
Thr
>WENV170249417
CEQS01011024
282474
Gammaproteobacteria
GAC
Val
>WENV170249952
CEQS01055624
112814
Gammaproteobacteria
GAG
Leu
>WENV170249592
CEQS01022991
276970
Gammaproteobacteria
CCG
Arg
>WENV170249392
CEQS01009710
182178
Gammaproteobacteria
CAA
Leu
>WENV170250058
CEQS01064078
655194
Gammaproteobacteria
GGT
Thr
>WENV170249594
CEQS01023067
655145
Gammaproteobacteria
CCT
Arg
>WENV170249828
CEQS01041974
271253
Gammaproteobacteria
CAT
Met
>WENV170249953
CEQS01055624
271253
Gammaproteobacteria
CAT
Met
>WENV170249549
CEQS01021993
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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