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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170256585
CEQX01107165
275828
Alphaproteobacteria
GTC
Asp
>WENV170255904
CEQX01033401
655365
Alphaproteobacteria
TTC
Glu
>WENV170256672
CEQX01116536
273797
Alphaproteobacteria
GGG
Pro
>WENV170256427
CEQX01087549
180489
Alphaproteobacteria
TAG
Leu
>WENV170256492
CEQX01094699
452917
Alphaproteobacteria
TAC
Val
>WENV170257260
CEQX01217354
780326
Alphaproteobacteria
CCC
Gly
>WENV170257434
CEQX01312019
455289
Alphaproteobacteria
TTT
Lys
>WENV170257291
CEQX01236005
454180
Alphaproteobacteria
CGT
Thr
>WENV170255814
CEQX01026092
218119
Alphaproteobacteria
>WENV170256228
CEQX01063194
653538
Alphaproteobacteria
TTC
Glu
>WENV170256717
CEQX01120960
655171
Alphaproteobacteria
GGT
Thr
>WENV170256118
CEQX01052965
661003
Alphaproteobacteria
GAA
Phe
>WENV170256799
CEQX01131958
154065
Alphaproteobacteria
GAG
Leu
>WENV170257495
CEQX01332012
479047
Alphaproteobacteria
TTT
Lys
>WENV170256808
CEQX01133224
653532
Alphaproteobacteria
GTT
Asn
>WENV170257011
CEQX01149394
274144
Alphaproteobacteria
GTG
His
>WENV170256233
CEQX01063473
455172
Alphaproteobacteria
GGC
Ala
>WENV170256882
CEQX01140307
655394
Alphaproteobacteria
GTT
Asn
>WENV170257198
CEQX01159203
273450
Alphaproteobacteria
TCT
Arg
>WENV170256833
CEQX01136785
274131
Alphaproteobacteria
CAT
Met
>WENV170255819
CEQX01026416
47329
Alphaproteobacteria
TGA
Ser
>WENV170255823
CEQX01027170
454059
Alphaproteobacteria
TTT
Lys
>WENV170256698
CEQX01118754
655358
Alphaproteobacteria
TTG
Gln
>WENV170257568
CEQX01347995
454512
Alphaproteobacteria
CCA
Trp
>WENV170255769
CEQX01021248
455360
Alphaproteobacteria
CGC
Ala
>WENV170256584
CEQX01107165
270796
Alphaproteobacteria
GTC
Asp
>WENV170256958
CEQX01145770
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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