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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263240
CERC01029334
275457
Gammaproteobacteria
ACG
Arg
>WENV170263213
CERC01027006
457453
Gammaproteobacteria
TTT
Lys
>WENV170263399
CERC01043212
271464
Gammaproteobacteria
TGG
Pro
>WENV170262993
CERC01010244
46027
Gammaproteobacteria
GGA
Ser
>WENV170262989
CERC01010104
656944
Gammaproteobacteria
CCT
Arg
>WENV170263357
CERC01038821
474520
Gammaproteobacteria
CCA
Trp
>WENV170263464
CERC01050458
278942
Gammaproteobacteria
CCG
Arg
>WENV170262937
CERC01006253
273870
Gammaproteobacteria
ACG
Arg
>WENV170262869
CERC01002102
273752
Gammaproteobacteria
CAT
Met
>WENV170263417
CERC01045093
276974
Gammaproteobacteria
GGG
Pro
>WENV170263444
CERC01048287
456247
Gammaproteobacteria
CCA
Trp
>WENV170263690
CERC01066332
502832
Gammaproteobacteria
GAA
Phe
>WENV170262975
CERC01008641
297860
Gammaproteobacteria
GAC
Val
>WENV170262924
CERC01005230
276971
Gammaproteobacteria
ACG
Arg
>WENV170262992
CERC01010244
463262
Gammaproteobacteria
TTT
Lys
>WENV170263070
CERC01016406
454857
Gammaproteobacteria
GTG
His
>WENV170263678
CERC01065997
274864
Gammaproteobacteria
ACG
Arg
>WENV170262880
CERC01002809
275002
Gammaproteobacteria
ACG
Arg
>WENV170262881
CERC01002809
275002
Gammaproteobacteria
ACG
Arg
>WENV170262882
CERC01002809
275002
Gammaproteobacteria
ACG
Arg
>WENV170263846
CERC01099117
278155
Gammaproteobacteria
TGG
Pro
>WENV170262997
CERC01010855
273749
Gammaproteobacteria
CCA
Trp
>WENV170263134
CERC01019947
273749
Gammaproteobacteria
CCA
Trp
>WENV170263161
CERC01022731
273749
Gammaproteobacteria
CCA
Trp
>WENV170263283
CERC01030709
276185
Gammaproteobacteria
TGG
Pro
>WENV170262976
CERC01008641
274775
Gammaproteobacteria
GAC
Val
>WENV170263434
CERC01046965
272970
Gammaproteobacteria
CCG
Arg
>WENV170263144
CERC01020877
282333
Gammaproteobacteria
GAC
Val
>WENV170263068
CERC01016320
456511
Gammaproteobacteria
GAA
Phe
>WENV170263067
CERC01016320
456511
Gammaproteobacteria
GAA
Phe
>WENV170262852
CERC01001100
502020
Gammaproteobacteria
TTC
Glu
>WENV170263206
CERC01026398
179997
Gammaproteobacteria
GTA
Tyr
>WENV170263527
CERC01054930
655197
Gammaproteobacteria
TTG
Gln
>WENV170263378
CERC01041139
452412
Gammaproteobacteria
GCC
Gly
>WENV170262840
CERC01000532
452412
Gammaproteobacteria
GCC
Gly
>WENV170262888
CERC01003035
30516
Gammaproteobacteria
TGA
Ser
>WENV170263115
CERC01018370
275518
Gammaproteobacteria
ACG
Arg
>WENV170263116
CERC01018370
275518
Gammaproteobacteria
ACG
Arg
>WENV170262928
CERC01005488
479074
Gammaproteobacteria
GCC
Gly
>WENV170262929
CERC01005488
479074
Gammaproteobacteria
GCC
Gly
>WENV170263642
CERC01064008
47267
Gammaproteobacteria
GGA
Ser
>WENV170263350
CERC01037795
454864
Gammaproteobacteria
TAC
Val
>WENV170263331
CERC01036150
781121
Gammaproteobacteria
GCA
Cys
>WENV170263416
CERC01044807
454968
Gammaproteobacteria
TAC
Val
>WENV170263605
CERC01062027
452377
Gammaproteobacteria
GTT
Asn
>WENV170262844
CERC01000858
113485
Gammaproteobacteria
CAA
Leu
>WENV170263996
CERC01132374
281567
Gammaproteobacteria
CAT
Met
>WENV170263653
CERC01064702
452881
Gammaproteobacteria
TGT
Thr
>WENV170263442
CERC01047904
114727
Gammaproteobacteria
TAA
Leu
>WENV170263652
CERC01064683
273121
Gammaproteobacteria
GAC
Val
>WENV170263332
CERC01036337
271613
Gammaproteobacteria
GTC
Asp
>WENV170263662
CERC01065242
271613
Gammaproteobacteria
GTC
Asp
>WENV170262966
CERC01007978
276972
Gammaproteobacteria
CCA
Trp
>WENV170263041
CERC01014274
275006
Gammaproteobacteria
GGG
Pro
>WENV170263644
CERC01064393
275006
Gammaproteobacteria
GGG
Pro
>WENV170263495
CERC01052887
459319
Gammaproteobacteria
GAA
Phe
>WENV170263034
CERC01013646
454397
Gammaproteobacteria
TGT
Thr
>WENV170262980
CERC01009146
276970
Gammaproteobacteria
CCG
Arg
>WENV170262891
CERC01003216
182178
Gammaproteobacteria
CAA
Leu
>WENV170263114
CERC01018370
31220
Gammaproteobacteria
GCT
Ser
>WENV170263230
CERC01028458
456267
Gammaproteobacteria
GAA
Phe
>WENV170263221
CERC01027763
47265
Gammaproteobacteria
TGA
Ser
>WENV170263414
CERC01044647
273328
Gammaproteobacteria
GAC
Val
>WENV170263593
CERC01060460
112363
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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